RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZNF85	Q03923	595 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	MFSD13A	Q14CX5	517 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	OR1C1	Q15619	314 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	ACSM3	Q53FZ2	586 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	FAM27D1	Q5T7N8	215 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	ADGRG3	Q86Y34	549 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	GIMAP1	Q8WWP7	306 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	C5orf34	Q96MH7	638 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	DPCD	Q9BVM2	203 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	MED20	Q9H944	212 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	DNAJB12	Q9NXW2	375 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	PPP4R1L	Q9P1A2	415 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	ST6GALNAC2	Q9UJ37	374 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	BAIAP2	Q9UQB8	552 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	FREM2	Q5SZK8	3169 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	CPAMD8	Q8IZJ3	1885 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	IGLV3-32	A0A0A0MS00	114 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	CENPVL1	A0A0U1RR11	272 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZC3H12D	A2A288	527 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	PRR23D1	E9PI22	279 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540		I3L521	148 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	BET1	O15155	118 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	OGG1	O15527	345 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	HCRTR2	O43614	444 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC25A12	O75746	678 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	MPC2	O95563	127 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	CD3G	P09693	182 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	RRAS	P10301	218 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	P2RX1	P51575	399 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	RPS7	P62081	194 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC3A1	Q07837	685 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	POU4F2	Q12837	409 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	CBFB	Q13951	182 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	POU4F3	Q15319	338 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	FAM69A	Q5T7M9	428 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	IGFL3	Q6UXB1	125 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	MARCH3	Q86UD3	253 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC43A2	Q8N370	569 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	DTX3	Q8N9I9	347 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM178A	Q8NBL3	297 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	UXS1	Q8NBZ7	420 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	FAM98A	Q8NCA5	519 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SMIM4	Q8WVI0	70 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM41A	Q96HV5	264 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	TBX5	Q99593	518 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	TEAD3	Q99594	435 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF559	Q9BR84	538 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	HCAR1	Q9BXC0	346 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	PTGES2	Q9H7Z7	377 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	ADGRL4	Q9HBW9	690 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	FLRT3	Q9NZU0	649 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	SPATA2	Q9UM82	520 aa		13.12	□□□□□ -0.31
NR1H3-231	ENST00000529540	AKAP13	Q12802	2813 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	EXPH5	Q8NEV8	1989 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	KLRC4-KLRK1	H3BQV0	150 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM127	O75204	238 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	NEURL1	O76050	574 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	TGM6	O95932	706 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	BMP7	P18075	431 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ATF1	P18846	271 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	PGC	P20142	388 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	MAK	P20794	623 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ITPKB	P27987	946 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF81	P51508	661 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZP1	P60852	638 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	CXADR	P78310	365 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	PUDP	Q08623	228 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	SKP2	Q13309	424 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	CD226	Q15762	336 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ELFN2	Q5R3F8	820 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMEM65	Q6PI78	240 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	APOOL	Q6UXV4	268 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	TMPRSS11F	Q6ZWK6	438 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZADH2	Q8N4Q0	377 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	PTP4A1	Q93096	173 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	C4orf36	Q96KX1	117 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	RBP7	Q96R05	134 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	TRIM2	Q9C040	744 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	NANS	Q9NR45	359 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	KIF25	Q9UIL4	384 aa		13.11	□□□□□ -0.31
NR1H3-231	ENST00000529540	APC2	O95996	2303 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	ACACA	Q13085	2346 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	TRAV17	A0A0B4J275	112 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540		A0A1B0GVC2	190 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	NAP1L6	A6NFF2	107 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540		A6NIN4	97 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540		G3V3Q6	166 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	PEX14	O75381	377 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	CCL3	P10147	92 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	EPX	P11678	715 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	C4BPB	P20851	252 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	CNR1	P21554	472 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	ENPP1	P22413	925 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	RAB14	P61106	215 aa		13.1	□□□□□ -0.31
NR1H3-231	ENST00000529540	SLC25A25	Q6KCM7	469 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms