RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 FAM156AQ8NDB6 213 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 RBM15BQ8NDT2 890 aaKnown RBP8.29□□□□□ -1.08
CHD7-208ENST00000528280 SLC30A7Q8NEW0 376 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 MOSPD2Q8NHP6 518 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 C11orf40Q8WZ69 217 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 POP5Q969H6 163 aaKnown RBP8.29□□□□□ -1.08
CHD7-208ENST00000528280 MRPL24Q96A35 216 aaKnown RBP8.29□□□□□ -1.08
CHD7-208ENST00000528280 HSH2DQ96JZ2 352 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 ZNF347Q96SE7 839 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 BCL2L14Q9BZR8 327 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 NMNAT1Q9HAN9 279 aaPredicted RBP8.29□□□□□ -1.08
CHD7-208ENST00000528280 CDH20Q9HBT6 801 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 CCNB1IP1Q9NPC3 277 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 YAE1D1Q9NRH1 226 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 DCAF13Q9NV06 445 aaKnown RBP8.29□□□□□ -1.08
CHD7-208ENST00000528280 GRHPRQ9UBQ7 328 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 REV1Q9UBZ9 1251 aa8.29□□□□□ -1.08
CHD7-208ENST00000528280 A0A087WUU8 490 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SH3PXD2BA1X283 911 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 C12orf71A8MTZ7 269 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 A8MV72 311 aaPredicted RBP8.28□□□□□ -1.08
CHD7-208ENST00000528280 M0R233 179 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 XKRYO14609 159 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 FFAR1O14842 300 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 DNAJC8O75937 253 aaPredicted RBP8.28□□□□□ -1.08
CHD7-208ENST00000528280 H1F0P07305 194 aaKnown RBP8.28□□□□□ -1.08
CHD7-208ENST00000528280 ADRA2AP08913 450 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 HSD17B1P14061 328 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 DAOP14920 347 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 TUBG1P23258 451 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 GIFP27352 417 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 RPL4P36578 427 aaKnown RBP8.28□□□□□ -1.08
CHD7-208ENST00000528280 UCP2P55851 309 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 HSF2Q03933 536 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 RUNX1T1Q06455 604 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SGCAQ16586 387 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 FXNQ16595 210 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 TMEM249Q2WGJ8 235 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 IQCCQ4KMZ1 466 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 GPR139Q6DWJ6 353 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 RGS7BPQ6MZT1 257 aaPredicted RBP8.28□□□□□ -1.08
CHD7-208ENST00000528280 C16orf89Q6UX73 402 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 HIPK1Q86Z02 1210 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 WDFY1Q8IWB7 410 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 ZNF786Q8N393 782 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SVOPLQ8N434 492 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 ARIH2OSQ8N7S6 290 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 OR51A7Q8NH64 312 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 ZNF519Q8TB69 540 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 UBASH3BQ8TF42 649 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 MCUR1Q96AQ8 359 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 PYURFQ96I23 114 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 FOXN4Q96NZ1 517 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SORCS2Q96PQ0 1159 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SEC61A2Q9H9S3 476 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 TUBG2Q9NRH3 451 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 TMEM160Q9NX00 188 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SLCO1C1Q9NYB5 712 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 ZNF224Q9NZL3 707 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 RHCGQ9UBD6 479 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 TAGLN3Q9UI15 199 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 MAGEL2Q9UJ55 1249 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 TIMM10BQ9Y5J6 103 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
CHD7-208ENST00000528280 VWC2LB2RUY7 222 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 H0YHG0 523 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 J3KTA2 159 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 WIPF1O43516 503 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 PRSS23O95084 383 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 STAMBPO95630 424 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 CD14P08571 375 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 CST2P09228 141 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 PATE4P0C8F1 98 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 MAKP20794 623 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 IFNGR2P38484 337 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 LIPAP38571 399 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 TMEM33P57088 247 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 MRPS11P82912 194 aaKnown RBP8.27□□□□□ -1.09
CHD7-208ENST00000528280 MYBPC1Q00872 1141 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 CARTPTQ16568 116 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 PCGF3Q3KNV8 242 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 FAM209AQ5JX71 171 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 SLC25A47Q6Q0C1 308 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 MYPOPQ86VE0 399 aaPredicted RBP8.27□□□□□ -1.09
CHD7-208ENST00000528280 PHC2Q8IXK0 858 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 PGAM4Q8N0Y7 254 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 LRRC18Q8N456 261 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 SYNPRQ8TBG9 265 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 HTRA1Q92743 480 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 HDAC2Q92769 488 aaKnown RBP8.27□□□□□ -1.09
CHD7-208ENST00000528280 HPS1Q92902 700 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 CDRT15Q96T59 188 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 MAN2C1Q9NTJ4 1040 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 NDUFAF4Q9P032 175 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 LPAR3Q9UBY5 353 aa8.27□□□□□ -1.09
CHD7-208ENST00000528280 EGFL7Q9UHF1 273 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms