RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 C16orf89Q6UX73 402 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 DPPA2Q7Z7J5 298 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 DEFB107AQ8IZN7 70 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-213ENST00000527897 LRRC75AQ8NAA5 344 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 MRPL24Q96A35 216 aaKnown RBP13.39□□□□□ -0.27
CAPN1-213ENST00000527897 NSMCE2Q96MF7 247 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 FOXN4Q96NZ1 517 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 NDEL1Q9GZM8 345 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 SIAEQ9HAT2 523 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 GRHPRQ9UBQ7 328 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 AURKCQ9UQB9 309 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
CAPN1-213ENST00000527897 TRBV4-1A0A0J9YWV2 114 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 A0A1W2PPW3 197 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 XKRYO14609 159 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 ARPC2O15144 300 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 CD5LO43866 347 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 PTHP01270 115 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 IGHMP01871 453 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 LCKP06239 509 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 USF1P22415 310 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-213ENST00000527897 APEX1P27695 318 aaKnown RBP13.38□□□□□ -0.27
CAPN1-213ENST00000527897 APLNRP35414 380 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 GLRXP35754 106 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 ALDH3B1P43353 468 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 MRPS34P82930 218 aaKnown RBP13.38□□□□□ -0.27
CAPN1-213ENST00000527897 SPIBQ01892 262 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 FHL1Q13642 323 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 DGCR6Q14129 220 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 MAD2L1BPQ15013 274 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-213ENST00000527897 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 ALKBH6Q3KRA9 238 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 IQCCQ4KMZ1 466 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 PABPC1L2AQ5JQF8 200 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 THEM4Q5T1C6 240 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 FAM205BPQ63HN1 556 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 SLC25A47Q6Q0C1 308 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 TMPRSS11FQ6ZWK6 438 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 OR1J2Q8NGS2 313 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 AKR7LQ8NHP1 331 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 ZNF519Q8TB69 540 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 MCUR1Q96AQ8 359 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 PYURFQ96I23 114 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 RERGLQ9H628 205 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 GORASP2Q9H8Y8 452 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 SMURF2Q9HAU4 748 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 IL20RAQ9UHF4 553 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 FBXO9Q9UK97 447 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-213ENST00000527897 UGT2A1Q9Y4X1 527 aa13.38□□□□□ -0.27
CAPN1-213ENST00000527897 SONP18583 2426 aaKnown RBP13.38□□□□□ -0.27
CAPN1-213ENST00000527897 CHD3Q12873 2000 aaKnown RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 M0R233 179 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 SYNGR3O43761 229 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 CD14P08571 375 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 HSD17B1P14061 328 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 DAOP14920 347 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ZNF32P17041 273 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ITGA2P17301 1181 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 LAP3P28838 519 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 LOXL1Q08397 574 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 SEC23BQ15437 767 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 FXNQ16595 210 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 NRN1LQ496H8 165 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ARIH2OSQ8N7S6 290 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 NABP1Q96AH0 204 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 NMD3Q96D46 503 aaKnown RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 Q96M85 177 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ZNF570Q96NI8 536 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 CCT8L2Q96SF2 557 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 C1orf198Q9H425 327 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 KRCC1Q9NPI7 259 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 NDE1Q9NXR1 346 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 MYEF2Q9P2K5 600 aaKnown RBP13.37□□□□□ -0.27
CAPN1-213ENST00000527897 REV1Q9UBZ9 1251 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
CAPN1-213ENST00000527897 RTTNQ86VV8 2226 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 A0A096LNT2 108 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 TEX13CA0A0J9YWL9 993 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 LOC390937A0A1W2PQ73 354 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 GADD45GO95257 159 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 MMP7P09237 267 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-213ENST00000527897 ZNF26P17031 533 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-213ENST00000527897 NR4A2P43354 598 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 NKPD1Q17RQ9 610 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 KRTAP21-3Q3LHN1 58 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 FNDC8Q8TC99 324 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 NEU4Q8WWR8 484 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms