RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 TTYH2Q9BSA4 534 aa18.22■□□□□ 0.51
SMCO4-203ENST00000526869 LDAHQ9H6V9 325 aa18.22■□□□□ 0.51
SMCO4-203ENST00000526869 SIAEQ9HAT2 523 aa18.22■□□□□ 0.51
SMCO4-203ENST00000526869 GLTPQ9NZD2 209 aa18.22■□□□□ 0.51
SMCO4-203ENST00000526869 MCTS1Q9ULC4 181 aaKnown RBP18.22■□□□□ 0.51
SMCO4-203ENST00000526869 LIPGQ9Y5X9 500 aa18.22■□□□□ 0.51
SMCO4-203ENST00000526869 IGKV1D-43A0A0B4J1Z2 117 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 LOC100506127A0A0U1RQW1 187 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 TRDV1A0A1B0GX56 115 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 METTL15A6NJ78 407 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 GPR171O14626 319 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 GPANK1O95872 356 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 HLA-DPB1P04440 258 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 KRT8P05787 483 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 ZNF823P16415 610 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 ZNF182P17025 639 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-203ENST00000526869 LAP3P28838 519 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 ADAM8P78325 824 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 ROM1Q03395 351 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 KCNMB1Q16558 191 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 DMKNQ6E0U4 476 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-203ENST00000526869 FAM220AQ7Z4H9 259 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 DYNC2LI1Q8TCX1 351 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 MCHR2Q969V1 340 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 TMEM45BQ96B21 275 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 CENPOQ9BU64 300 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 DEFB127Q9H1M4 99 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 RNF122Q9H9V4 155 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 ST6GALNAC2Q9UJ37 374 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 FOXD3Q9UJU5 478 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-203ENST00000526869 GNG8Q9UK08 70 aa18.21■□□□□ 0.51
SMCO4-203ENST00000526869 A0A1B0GVC2 190 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 E9PI62 339 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 MKRN2OSH3BPM6 223 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 K7ENP7 123 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 ABHD16AO95870 558 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 ITGB2P05107 769 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 FGF9P31371 208 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-203ENST00000526869 UCNP55089 124 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 RPS25P62851 125 aaKnown RBP18.2■□□□□ 0.5
SMCO4-203ENST00000526869 SIRPAP78324 504 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 RASGEF1BQ0VAM2 473 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 CARD17Q5XLA6 110 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 RPL22L1Q6P5R6 122 aaKnown RBP18.2■□□□□ 0.5
SMCO4-203ENST00000526869 INO80CQ6PI98 192 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-203ENST00000526869 Q6ZS92 163 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 FOXL2NBQ6ZUU3 175 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 ZFP41Q8N8Y5 198 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 OR10H5Q8NGA6 315 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 OR6N1Q8NGY5 312 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 RPS4Y2Q8TD47 263 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 RNF128Q8TEB7 428 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 ROBO4Q8WZ75 1007 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 ZNF845Q96IR2 970 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-203ENST00000526869 DCSTAMPQ9H295 470 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 CXorf56Q9H5V9 222 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 EXO5Q9H790 373 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 SIRT4Q9Y6E7 314 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-203ENST00000526869 SPTBN2O15020 2390 aa18.2■□□□□ 0.5
SMCO4-203ENST00000526869 PRR32B1ATL7 298 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 TMCC2O75069 709 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 SLC43A1O75387 559 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 QDPRP09417 244 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 SPARCP09486 303 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 PMP22Q01453 160 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 CDK5R1Q15078 307 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 INAQ16352 499 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 KCTD18Q6PI47 426 aaPredicted RBP18.19■□□□□ 0.5
SMCO4-203ENST00000526869 LRFN4Q6PJG9 635 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 C20orf196Q8IYI0 205 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 THEM6Q8WUY1 208 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 WDYHV1Q96HA8 205 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 OR8B4Q96RC9 309 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 EXOSC4Q9NPD3 245 aaKnown RBP18.19■□□□□ 0.5
SMCO4-203ENST00000526869 ACOXLQ9NUZ1 547 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 EMC3Q9P0I2 261 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 SPRR3Q9UBC9 169 aa18.19■□□□□ 0.5
SMCO4-203ENST00000526869 MRM2Q9UI43 246 aaKnown RBP18.19■□□□□ 0.5
SMCO4-203ENST00000526869 APC2O95996 2303 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 ALPK2Q86TB3 2170 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 GPRIN2O60269 458 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 PSKH1P11801 424 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 SRYQ05066 204 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 DGUOKQ16854 277 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 RPUSD3Q6P087 351 aaKnown RBP18.18■□□□□ 0.5
SMCO4-203ENST00000526869 ARL9Q6T311 187 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 MS4A15Q8N5U1 240 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 C11orf40Q8WZ69 217 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 NSMAFQ92636 917 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 SMIM19Q96E16 107 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 DACH2Q96NX9 599 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 FOXN4Q96NZ1 517 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 TTTY10Q9BZA0 68 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 PLSCR2Q9NRY7 297 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 TXNL4BQ9NX01 149 aaKnown RBP18.18■□□□□ 0.5
SMCO4-203ENST00000526869 ING1Q9UK53 422 aaPredicted RBP18.18■□□□□ 0.5
SMCO4-203ENST00000526869 GSTK1Q9Y2Q3 226 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 ZNF175Q9Y473 711 aa18.18■□□□□ 0.5
SMCO4-203ENST00000526869 TNRC6AQ8NDV7 1962 aaKnown RBP18.18■□□□□ 0.5
SMCO4-203ENST00000526869 PIEZO1Q92508 2521 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms