RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, human

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD7-204	ENST00000526846	RAP2A	P10114	183 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	APEH	P13798	732 aa	Known RBP	13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	PPP1R8	Q12972	351 aa	Known RBP	13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	TSPAN31	Q12999	210 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	KRR1	Q13601	381 aa	Known RBP	13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	RAB39A	Q14964	217 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	ADIPOQ	Q15848	244 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	SWI5	Q1ZZU3	235 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	FAM98B	Q52LJ0	330 aa	Known RBP	13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	GPR139	Q6DWJ6	353 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	OR2T5	Q6IEZ7	315 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	SMARCD3	Q6STE5	483 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	DPY19L2P2	Q6ZN68	376 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	ZNF620	Q6ZNG0	422 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	PTCHD4	Q6ZW05	846 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	YTHDF3	Q7Z739	585 aa	Known RBP	13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	DPPA2	Q7Z7J5	298 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	FBXL14	Q8N1E6	418 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	IL17RD	Q8NFM7	739 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	OR4F15	Q8NGB8	312 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	OR2T29	Q8NH02	315 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	FANK1	Q8TC84	345 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	NSMAF	Q92636	917 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	RBP7	Q96R05	134 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	KCNS3	Q9BQ31	491 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	OR52D1	Q9H346	318 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	SIAE	Q9HAT2	523 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	VSX1	Q9NZR4	365 aa	Predicted RBP	13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	GRHPR	Q9UBQ7	328 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	TMCC3	Q9ULS5	477 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	POMP	Q9Y244	141 aa		13.9	□□□□□ -0.18
CHD7-204	ENST00000526846	YLPM1	P49750	1951 aa	Known RBP	13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	TCRBV3S1	A0A5B6	114 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	RAB36	O95755	333 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	IGHV4-39	P01824	125 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	SERPINA5	P05154	406 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	SCG5	P05408	212 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	ATP5J2	P56134	94 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	ETFDH	Q16134	617 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	MSMP	Q1L6U9	139 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	RFX4	Q33E94	735 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	FAM27B	Q5VT28	67 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	DNM1P46	Q6ZS02	220 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	SLC16A14	Q7RTX9	510 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	GNPDA2	Q8TDQ7	276 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	CANT1	Q8WVQ1	401 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	LRGUK	Q96M69	825 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	CACNG6	Q9BXT2	260 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	NDEL1	Q9GZM8	345 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	ZNF442	Q9H7R0	627 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	SLC7A8	Q9UHI5	535 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	GDF2	Q9UK05	429 aa	Predicted RBP	13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	FBXL3	Q9UKT7	428 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	IER3IP1	Q9Y5U9	82 aa		13.89	□□□□□ -0.19
CHD7-204	ENST00000526846	MTOR	P42345	2549 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	DHRS12	A0PJE2	317 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846		H7C417	338 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	ARPC3	O15145	178 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	PPP1R3D	O95685	299 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	CD99	P14209	185 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	CTLA4	P16410	223 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	NPR2	P20594	1047 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	NR4A1	P22736	598 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	THBS4	P35443	961 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	IFNGR2	P38484	337 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	CDKN2A	P42771	156 aa	Known RBP	13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	ENDOG	Q14249	297 aa	Known RBP	13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	EFNB3	Q15768	340 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	SLC36A2	Q495M3	483 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	LRRC18	Q8N456	261 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	LINC00471	Q8N535	108 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	FBXO17	Q96EF6	278 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	SAMD8	Q96LT4	415 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846		Q96MF0	132 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	CHID1	Q9BWS9	393 aa		13.88	□□□□□ -0.19
CHD7-204	ENST00000526846	TMEM129	A0AVI4	362 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	SOCS2	O14508	198 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	CCNB2	O95067	398 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	GAST	P01350	101 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	TP53	P04637	393 aa	Predicted RBP	13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	ZNF32	P17041	273 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	SLC6A6	P31641	620 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	RPS6KA3	P51812	740 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	FLOT2	Q14254	428 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	SGCA	Q16586	387 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	MICA	Q29983	383 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	TMEM53	Q6P2H8	277 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	ADCK1	Q86TW2	530 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	PAPD5	Q8NDF8	572 aa	Known RBP	13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	CPEB3	Q8NE35	698 aa	Known RBP	13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	TRMT61A	Q96FX7	289 aa	Known RBP	13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	PLA2G12A	Q9BZM1	189 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	SYT4	Q9H2B2	425 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	POLE4	Q9NR33	117 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	CDH10	Q9Y6N8	788 aa		13.87	□□□□□ -0.19
CHD7-204	ENST00000526846	DCTN6	O00399	190 aa		13.86	□□□□□ -0.19
CHD7-204	ENST00000526846	XKRY	O14609	159 aa		13.86	□□□□□ -0.19
CHD7-204	ENST00000526846	GPRIN2	O60269	458 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms