RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 NDUFS7O75251 213 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ATP6V1G2O95670 118 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 WNT11O96014 354 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 GASTP01350 101 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 QDPRP09417 244 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 APEHP13798 732 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 ZNF26P17031 533 aaPredicted RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 PAX7P23759 505 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 SDHAP31040 664 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ZNF84P51523 738 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 FXYD6P3P58550 94 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ARF1P84077 181 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 RUNX1T1Q06455 604 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ATRQ13535 2644 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 KRR1Q13601 381 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 SHQ1Q6PI26 577 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 THSD4Q6ZMP0 1018 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ZNF813Q6ZN06 617 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 RASSF6Q6ZTQ3 369 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 FAM122BQ7Z309 247 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ADCK1Q86TW2 530 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 DTX2Q86UW9 622 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 WDFY1Q8IWB7 410 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 CLDN22Q8N7P3 220 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ARIH2OSQ8N7S6 290 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 SYT14Q8NB59 555 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 OR52N5Q8NH56 324 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 OR5K1Q8NHB7 308 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ZNF519Q8TB69 540 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 MAGEE2Q8TD90 523 aaPredicted RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 HDAC2Q92769 488 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 BOD1Q96IK1 185 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 Q96M85 177 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 RBP7Q96R05 134 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 FOXB1Q99853 325 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 IFT27Q9BW83 186 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 MRPL13Q9BYD1 178 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 DCLRE1BQ9H816 532 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ZNF556Q9HAH1 456 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 SMURF2Q9HAU4 748 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 MOV10Q9HCE1 1003 aaKnown RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 S100A14Q9HCY8 104 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 NRIP3Q9NQ35 241 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 NPAP1Q9NZP6 1156 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 KIF17Q9P2E2 1029 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 IL20RAQ9UHF4 553 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 GDF2Q9UK05 429 aaPredicted RBP8.84□□□□□ -0.99
VPS28-204ENST00000526054 ADAM18Q9Y3Q7 739 aa8.84□□□□□ -0.99
VPS28-204ENST00000526054 ABCA1O95477 2261 aa8.83□□□□□ -1
VPS28-204ENST00000526054 A0A096LPE4 126 aa8.83□□□□□ -1
VPS28-204ENST00000526054 ARPC4-TTLL3A0A0A6YYG9 625 aa8.83□□□□□ -1
VPS28-204ENST00000526054 A0A1W2PPZ6 126 aa8.83□□□□□ -1
VPS28-204ENST00000526054 SOCS2O14508 198 aa8.83□□□□□ -1
VPS28-204ENST00000526054 IMPA2O14732 288 aa8.83□□□□□ -1
VPS28-204ENST00000526054 ARPC3O15145 178 aa8.83□□□□□ -1
VPS28-204ENST00000526054 DHHO43323 396 aa8.83□□□□□ -1
VPS28-204ENST00000526054 TLX2O43763 284 aaPredicted RBP8.83□□□□□ -1
VPS28-204ENST00000526054 AHCYL1O43865 530 aa8.83□□□□□ -1
VPS28-204ENST00000526054 CD5LO43866 347 aa8.83□□□□□ -1
VPS28-204ENST00000526054 SSX4O60224 188 aa8.83□□□□□ -1
VPS28-204ENST00000526054 FARS2O95363 451 aaKnown RBP8.83□□□□□ -1
VPS28-204ENST00000526054 PPP1R3DO95685 299 aa8.83□□□□□ -1
VPS28-204ENST00000526054 CD8AP01732 235 aa8.83□□□□□ -1
VPS28-204ENST00000526054 ANXA8P13928 327 aa8.83□□□□□ -1
VPS28-204ENST00000526054 B4GALT1P15291 398 aa8.83□□□□□ -1
VPS28-204ENST00000526054 NOS3P29474 1203 aa8.83□□□□□ -1
VPS28-204ENST00000526054 NUDT6P53370 316 aa8.83□□□□□ -1
VPS28-204ENST00000526054 MYBPC1Q00872 1141 aa8.83□□□□□ -1
VPS28-204ENST00000526054 COX10Q12887 443 aa8.83□□□□□ -1
VPS28-204ENST00000526054 RCN1Q15293 331 aa8.83□□□□□ -1
VPS28-204ENST00000526054 HIST3H3Q16695 136 aa8.83□□□□□ -1
VPS28-204ENST00000526054 HIKESHIQ53FT3 197 aa8.83□□□□□ -1
VPS28-204ENST00000526054 THEM4Q5T1C6 240 aa8.83□□□□□ -1
VPS28-204ENST00000526054 C10orf128Q5T292 105 aa8.83□□□□□ -1
VPS28-204ENST00000526054 AGAP6Q5VW22 663 aa8.83□□□□□ -1
VPS28-204ENST00000526054 KLHL17Q6TDP4 642 aa8.83□□□□□ -1
VPS28-204ENST00000526054 TMEM108Q6UXF1 575 aa8.83□□□□□ -1
VPS28-204ENST00000526054 CD300LDQ6UXZ3 194 aa8.83□□□□□ -1
VPS28-204ENST00000526054 DNM1P46Q6ZS02 220 aa8.83□□□□□ -1
VPS28-204ENST00000526054 TMEM179BQ7Z7N9 219 aa8.83□□□□□ -1
VPS28-204ENST00000526054 JAZF1Q86VZ6 243 aa8.83□□□□□ -1
VPS28-204ENST00000526054 HIPK1Q86Z02 1210 aa8.83□□□□□ -1
VPS28-204ENST00000526054 CCDC36Q8IYA8 594 aa8.83□□□□□ -1
VPS28-204ENST00000526054 PIAS4Q8N2W9 510 aaPredicted RBP8.83□□□□□ -1
VPS28-204ENST00000526054 ATG16L2Q8NAA4 619 aa8.83□□□□□ -1
VPS28-204ENST00000526054 TEX47Q8TBZ9 253 aa8.83□□□□□ -1
VPS28-204ENST00000526054 PYDC1Q8WXC3 89 aa8.83□□□□□ -1
VPS28-204ENST00000526054 DNAJC9Q8WXX5 260 aa8.83□□□□□ -1
VPS28-204ENST00000526054 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
VPS28-204ENST00000526054 BCL2L2Q92843 193 aaPredicted RBP8.83□□□□□ -1
VPS28-204ENST00000526054 MCHR2Q969V1 340 aa8.83□□□□□ -1
VPS28-204ENST00000526054 RASD2Q96D21 266 aa8.83□□□□□ -1
VPS28-204ENST00000526054 RADILQ96JH8 1075 aa8.83□□□□□ -1
VPS28-204ENST00000526054 SAMD8Q96LT4 415 aa8.83□□□□□ -1
VPS28-204ENST00000526054 ERMAPQ96PL5 475 aaPredicted RBP8.83□□□□□ -1
VPS28-204ENST00000526054 FEVQ99581 238 aa8.83□□□□□ -1
VPS28-204ENST00000526054 GRIP2Q9C0E4 1043 aa8.83□□□□□ -1
VPS28-204ENST00000526054 RASSF4Q9H2L5 321 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms