RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 LINGO2Q7L985 606 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ZNF550Q7Z398 422 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 HMGN2P46Q86SG4 172 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 MARCH3Q86UD3 253 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 VRK2Q86Y07 508 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 MISPQ8IVT2 679 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 RBMXL3Q8N7X1 1067 aaKnown RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 ZNF614Q8N883 585 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 POC5Q8NA72 575 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SMYD1Q8NB12 490 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 OR10G3Q8NGC4 313 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 PAQR8Q8TEZ7 354 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 LZICQ8WZA0 190 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 PROX1Q92786 737 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 TAMM41Q96BW9 452 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 CCDC124Q96CT7 223 aaKnown RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 SCMH1Q96GD3 660 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 RNF145Q96MT1 663 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SIGLEC12Q96PQ1 595 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 NODALQ96S42 347 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 DOHHQ9BU89 302 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ANGPTL4Q9BY76 406 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 PRORYQ9H606 182 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 EVA1AQ9H8M9 152 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 HHATLQ9HCP6 504 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 DCAF13Q9NV06 445 aaKnown RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 KLHL28Q9NXS3 571 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 KLRF1Q9NZS2 232 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 FLRT3Q9NZU0 649 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ABCG2Q9UNQ0 655 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SAMD4AQ9UPU9 718 aaKnown RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 ZNF443Q9Y2A4 671 aaPredicted RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 SLC35A3Q9Y2D2 325 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 KCNK7Q9Y2U2 307 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SH3GLB1Q9Y371 365 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 PCNX3Q9H6A9 2034 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 URB1O60287 2271 aaKnown RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 DSPPQ9NZW4 1301 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PLSCR5A0PG75 271 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 CLDN24A6NM45 220 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 NPIPB11E5RHQ5 1161 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PRR23D1E9PI22 279 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 SEC14L5O43304 696 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 SCO2O43819 266 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 KIAA0513O60268 411 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 EIF4E2O60573 245 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 DPM1O60762 260 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 NOL3O60936 208 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 TSC22D2O75157 780 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 CBR3O75828 277 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 CSTAP01040 98 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OPN1SWP03999 348 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 LINGO3P0C6S8 592 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 GKN3PP0CG01 181 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PRR23D2P0DMB1 279 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 CCL3P10147 92 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ITGA2P17301 1181 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ATP6V1B2P21281 511 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 RPS4Y1P22090 263 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 SSTR2P30874 369 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 IFNA8P32881 189 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 EVI2BP34910 448 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PTGDSP41222 190 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OR1E2P47887 323 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 COMPP49747 757 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 TNFSF10P50591 281 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 P2RX1P51575 399 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ACTR3P61158 418 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 EEF1A1P68104 462 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 RPL36AP83881 106 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 CHRNB3Q05901 458 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 COL28A1Q2UY09 1125 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 LINC00303Q3SY05 128 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 LIN52Q52LA3 116 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 FAM98BQ52LJ0 330 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 IFI44LQ53G44 452 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 EIPR1Q53HC9 387 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 C9orf152Q5JTZ5 239 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 MRPL2Q5T653 305 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 PRAMEF20Q5VT98 475 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 TIGD3Q6B0B8 471 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OR5M10Q6IEU7 315 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 LCN8Q6JVE9 175 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 SLC25A24Q6NUK1 477 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 DHRS4L2Q6PKH6 230 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 B3GNT6Q6ZMB0 384 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ZNF836Q6ZNA1 936 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ASB18Q6ZVZ8 466 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 SPATA24Q86W54 205 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PLCZ1Q86YW0 608 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 GRAMD2AQ8IUY3 354 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 AQP12AQ8IXF9 295 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ZNF440Q8IYI8 595 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 GATSQ8NAP1 163 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 TMEM178AQ8NBL3 297 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 MDS2Q8NDY4 140 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 GPR32P1Q8NGA4 272 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OR10Q1Q8NGQ4 319 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OR1J4Q8NGS1 313 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OR5W2Q8NH69 310 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms