RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KPNA4O00629 521 aaPredicted RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 PLPP3O14495 311 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 GYG2O15488 501 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 TPST2O60704 377 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 PRSS23O95084 383 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 OR6A2O95222 327 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 GPANK1O95872 356 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SERPINA5P05154 406 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 QDPRP09417 244 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SBK2P0C263 348 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 OR8G3PP0DMU2 310 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ANPEPP15144 967 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 OMGP23515 440 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ZFP36P26651 326 aaKnown RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 COMPP49747 757 aaPredicted RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 GZMMP51124 257 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SLC7A2P52569 658 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 CDH12P55289 794 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 PCBP3P57721 371 aaKnown RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 MTPNP58546 118 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 UBA52P62987 128 aaKnown RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 SCARB2Q14108 478 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 VMACQ2NL98 169 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 THEM4Q5T1C6 240 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 LRFN4Q6PJG9 635 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 NHLRC1Q6VVB1 395 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SLC35D2Q76EJ3 337 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 CCDC80Q76M96 950 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 C1QL2Q7Z5L3 287 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 MICU2Q8IYU8 434 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 DEFB107AQ8IZN7 70 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SLC22A24Q8N4F4 322 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 LRRC17Q8N6Y2 441 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SMYD1Q8NB12 490 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SYT14Q8NB59 555 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SLC30A7Q8NEW0 376 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ANKK1Q8NFD2 765 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 OR4K5Q8NGD3 323 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 OR10A6Q8NH74 314 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 SNX33Q8WV41 574 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 C11orf40Q8WZ69 217 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ZMYND19Q96E35 227 aaPredicted RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 SLC47A1Q96FL8 570 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ZNF583Q96ND8 569 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 JMJD8Q96S16 334 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 GAL3ST1Q99999 423 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 KCTD14Q9BQ13 255 aaPredicted RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 SUCNR1Q9BXA5 334 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 MOV10Q9HCE1 1003 aaKnown RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 MMP26Q9NRE1 261 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 TNFRSF19Q9NS68 423 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 CMTM6Q9NX76 183 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 DCAF16Q9NXF7 216 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 TAS2R1Q9NYW7 299 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 GLTPQ9NZD2 209 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 OPN4Q9UHM6 478 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ZNF346Q9UL40 294 aaKnown RBP5.6□□□□□ -1.51
CD44-221ENST00000526000 A0A0G2JMP0 313 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 A0A0X1KG70 313 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 LOC102725191A0A1B0GVB3 256 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 CPSF4LA6NMK7 179 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 M0R3H8 397 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 NME4O00746 187 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 DHHO43323 396 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 RNF13O43567 381 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 DEAF1O75398 565 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 UBL3O95164 117 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 IGHV2-5P01817 119 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 OPN1SWP03999 348 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 UMPSP11172 480 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 FPR2P25090 351 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 PRKAR1BP31321 381 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 CDAP32320 146 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 MPV17P39210 176 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 CRYBB2P43320 205 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 GSK3BP49841 420 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 UCP2P55851 309 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 KLF3P57682 345 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 RGS8P57771 180 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 NCALDP61601 193 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 RPS23P62266 143 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 PLP2Q04941 152 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 LIPEQ05469 1076 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 SRSF4Q08170 494 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 PUDPQ08623 228 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 TRAP1Q12931 704 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 SCGB2A2Q13296 93 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 SELPLGQ14242 412 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 SGCAQ16586 387 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 HFEQ30201 348 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 RABL3Q5HYI8 236 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 TMEM53Q6P2H8 277 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 ULK3Q6PHR2 472 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 DHRS4L2Q6PKH6 230 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 RBMS3Q6XE24 437 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 SLC16A14Q7RTX9 510 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 PTOV1Q86YD1 416 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 RBM45Q8IUH3 476 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 C10orf67Q8IYJ2 551 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms