RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 OR5K4A6NMS3 321 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 OR52A4PA6NMU1 304 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 IQCF5A8MTL0 148 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 G3V3Y1 287 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 H0YC42 278 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LGALS8O00214 317 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 PRMT5O14744 637 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 NDC80O14777 642 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LIN7AO14910 233 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 HAT1O14929 419 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 POLR3GO15318 223 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 NIPSNAP2O75323 286 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 ZNF254O75437 659 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 TTC4O95801 387 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 FTH1P02794 183 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 SLC35G4P0C7Q5 338 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 THRAP10827 490 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 XRCC1P18887 633 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 TSPAN8P19075 237 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CCR7P32248 378 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CAPZBP47756 277 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 SLC6A8P48029 635 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 TTPAP49638 278 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 SLC25A1P53007 311 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 GFERP55789 205 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CCL7P80098 99 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CAV1Q03135 178 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 PDIA2Q13087 525 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 SERTAD2Q14140 314 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 RCN1Q15293 331 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 ZIC1Q15915 447 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 HSP90AA5PQ58FG0 334 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LINC00242Q5T6M2 205 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 SLX4IPQ5VYV7 408 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 PTRHD1Q6GMV3 140 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 ATRAIDQ6UW56 229 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 WASH2PQ6VEQ5 465 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CERS6Q6ZMG9 384 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 ADAMTSL5Q6ZMM2 481 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LRRC6Q86X45 466 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 PDIK1LQ8N165 341 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LINC00469Q8N7U9 141 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CEP112Q8N8E3 955 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 Q8N9G6 341 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 FBXO36Q8NEA4 188 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 OR6C4Q8NGE1 309 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 ELMO1Q92556 727 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 DLX4Q92988 240 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 LRRC39Q96DD0 335 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CXorf40BQ96DE9 158 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 DNAJA3Q96EY1 480 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 ELMO2Q96JJ3 720 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 C12orf66Q96MD2 445 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 BIRC8Q96P09 236 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 RBM14Q96PK6 669 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 TMEM237Q96Q45 408 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 CCT8L2Q96SF2 557 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 NAT9Q9BTE0 207 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 TBC1D10AQ9BXI6 508 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LRRN3Q9H3W5 708 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 VPS37BQ9H9H4 285 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 UCK1Q9HA47 277 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 RDH14Q9HBH5 336 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 FBXO6Q9NRD1 293 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 FAM114A2Q9NRY5 505 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 C20orf96Q9NUD7 363 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 DCAF13Q9NV06 445 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 IMP3Q9NV31 184 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 KLRF1Q9NZS2 232 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 TMEM9Q9P0T7 183 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 GHRLQ9UBU3 117 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 GNPTGQ9UJJ9 305 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 LAMP5Q9UJQ1 280 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 PURGQ9UJV8 347 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 ANGPTL2Q9UKU9 493 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 NTNG1Q9Y2I2 539 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 UTP11Q9Y3A2 253 aaKnown RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 RNF115Q9Y4L5 304 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 NEUROG3Q9Y4Z2 214 aa2.93□□□□□ -1.94
CD44-219ENST00000525685 MN1Q10571 1320 aaPredicted RBP2.93□□□□□ -1.94
CD44-219ENST00000525685 SDK1Q7Z5N4 2213 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 IGHV5-10-1A0A0J9YXX1 117 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 A0A1W2PNU3 283 aaPredicted RBP2.92□□□□□ -1.94
CD44-219ENST00000525685 TCRBV9S1A1TA0A576 114 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 BTN3A3O00478 584 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 RASGRF2O14827 1237 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 PFDN6O15212 129 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 EIF3HO15372 352 aaKnown RBP eCLIP2.92□□□□□ -1.94
CD44-219ENST00000525685 DUX1O43812 170 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 PIAS1O75925 651 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 STK17BO94768 372 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 PAHP00439 452 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 IGHG3P01860 377 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 C1QAP02745 245 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 S100A6P06703 90 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GSTT2P0CG29 244 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GSTT2BP0CG30 244 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 SLC35E2P0CK97 266 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 AZU1P20160 251 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GDF1P27539 372 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms