RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 APEHP13798 732 aaKnown RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 ZNF16P17020 682 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 TCN1P20061 433 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 PRDX6P30041 224 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 ALDH3B1P43353 468 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 GPR4P46093 362 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 GZMKP49863 264 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 ZNF133P52736 654 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 MRPS34P82930 218 aaKnown RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 TBC1D28Q2M2D7 210 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 CHRFAM7AQ494W8 412 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 RGS7BPQ6MZT1 257 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 MBOAT2Q6ZWT7 520 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 RNF148Q8N7C7 305 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 CLDN22Q8N7P3 220 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 UBASH3BQ8TF42 649 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 NMD3Q96D46 503 aaKnown RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 ALG12Q9BV10 488 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 BPESC1Q9GZL8 116 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 MS4A5Q9H3V2 200 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 NMNAT1Q9HAN9 279 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 SMURF2Q9HAU4 748 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 FAM32AQ9Y421 112 aaKnown RBP15.96■□□□□ 0.15
CAPN1-203ENST00000525013 UGT2A1Q9Y4X1 527 aa15.96■□□□□ 0.15
CAPN1-203ENST00000525013 IGKV1D-43A0A0B4J1Z2 117 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 IGHV4-61A0A0C4DH41 118 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 SLC22A23A1A5C7 686 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 GMNCA6NCL1 334 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 A6NIZ1 184 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 MGRN1O60291 552 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 PRSS23O95084 383 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 LCKP06239 509 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 APEX1P27695 318 aaKnown RBP15.95■□□□□ 0.14
CAPN1-203ENST00000525013 APLNRP35414 380 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 RPL4P36578 427 aaKnown RBP15.95■□□□□ 0.14
CAPN1-203ENST00000525013 GUCA1AP43080 201 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-203ENST00000525013 SLC9A3P48764 834 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 SELENOVP59797 346 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 RAP1BP61224 184 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 RAP1AP62834 184 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 MAD2L1BPQ15013 274 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-203ENST00000525013 ANKDD1AQ495B1 522 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 PABPC1L2AQ5JQF8 200 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 THEM4Q5T1C6 240 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 FAM205BPQ63HN1 556 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 GLYATQ6IB77 296 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 SLC25A47Q6Q0C1 308 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 ICA1LQ8NDH6 482 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 TSPAN32Q96QS1 320 aa15.95■□□□□ 0.14
CAPN1-203ENST00000525013 MYEF2Q9P2K5 600 aaKnown RBP15.95■□□□□ 0.14
CAPN1-203ENST00000525013 LYNX1G3V0Z9 82 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 IGHMP01871 453 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 H1F0P07305 194 aaKnown RBP15.94■□□□□ 0.14
CAPN1-203ENST00000525013 MMP7P09237 267 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-203ENST00000525013 LYNX1P0DP58 116 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 CCNOP22674 350 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 GYS2P54840 703 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 ERVK-25P63136 954 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 FGD3Q5JSP0 725 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 ZNF786Q8N393 782 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 LRRC75AQ8NAA5 344 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 FNDC8Q8TC99 324 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 NABP1Q96AH0 204 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 TMEM5Q9Y2B1 443 aa15.94■□□□□ 0.14
CAPN1-203ENST00000525013 LOC100289279A0A1B0GTE1 492 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 A0A1W2PPL8 197 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 CDC42EP2O14613 210 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 SNAP29O95721 258 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 NAT2P11245 290 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 ZNF23P17027 643 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 ZNF32P17041 273 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 GIFP27352 417 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 RAD52P43351 418 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 GNGT1P63211 74 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 FHL1Q13642 323 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 NKPD1Q17RQ9 610 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 ALKBH6Q3KRA9 238 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 ZBED5Q49AG3 693 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 PODNL1Q6PEZ8 512 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 TMPRSS11FQ6ZWK6 438 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 TSEN54Q7Z6J9 526 aaKnown RBP15.93■□□□□ 0.14
CAPN1-203ENST00000525013 FAM156AQ8NDB6 213 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 CPEB3Q8NE35 698 aaKnown RBP15.93■□□□□ 0.14
CAPN1-203ENST00000525013 AKR7LQ8NHP1 331 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 ZNF519Q8TB69 540 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 SLC7A13Q8TCU3 470 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 C11orf40Q8WZ69 217 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 FAM46AQ96IP4 442 aaKnown RBP15.93■□□□□ 0.14
CAPN1-203ENST00000525013 BEX2Q9BXY8 128 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 NDEL1Q9GZM8 345 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 ANKRD19PQ9H560 264 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 DCAF13Q9NV06 445 aaKnown RBP15.93■□□□□ 0.14
CAPN1-203ENST00000525013 GRHPRQ9UBQ7 328 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 SAMD4AQ9UPU9 718 aaKnown RBP15.93■□□□□ 0.14
CAPN1-203ENST00000525013 V9GYQ6 96 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 MXRA5Q9NR99 2828 aa15.93■□□□□ 0.14
CAPN1-203ENST00000525013 LRP5LA4QPB2 252 aa15.92■□□□□ 0.14
CAPN1-203ENST00000525013 H7C1C5 153 aa15.92■□□□□ 0.14
CAPN1-203ENST00000525013 LMX1BO60663 402 aa15.92■□□□□ 0.14
CAPN1-203ENST00000525013 CLPTM1O96005 669 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms