RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 OR2T1O43869 369 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 CSF1P09603 554 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 RPA2P15927 270 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 MAOAP21397 527 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 TSFMP43897 325 aaKnown RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 KCNJ3P48549 501 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 RIPPLY1Q0D2K3 151 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ITPRIPL2Q3MIP1 535 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 MESTQ5EB52 335 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 GLYATL3Q5SZD4 288 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 LINC00114Q6XXX2 140 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 TMEM200AQ86VY9 491 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 CA13Q8N1Q1 262 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 BHLHE23Q8NDY6 225 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 RERGQ96A58 199 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 STACQ99469 402 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 SLC6A7Q99884 636 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 PELOQ9BRX2 385 aaKnown RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ELOVL3Q9HB03 270 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 FAM60AQ9NP50 221 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ACTR10Q9NZ32 417 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 GLS2Q9UI32 602 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 A0A087WUJ7 227 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 TPPPO94811 219 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 MPZL1O95297 269 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 DCNP07585 359 aaKnown RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ST6GAL1P15907 406 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 VAMP1P23763 118 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 GJA4P35212 333 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 MNDAP41218 407 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 SKP1P63208 163 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 MFGE8Q08431 387 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 PLEKHN1Q494U1 663 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 RAB12Q6IQ22 244 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ABHD13Q7L211 337 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 TM4SF19Q96DZ7 209 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 SEH1LQ96EE3 360 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 LPAR4Q99677 370 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 CMKLR1Q99788 373 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 KIR3DX1Q9H7L2 352 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 TMED7Q9Y3B3 224 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 FAM96BQ9Y3D0 163 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 LINC01553A4QN01 128 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 NKX2-2O95096 273 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 ACTL6AO96019 429 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CBR1P16152 277 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CD34P28906 385 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 MAP3K8P41279 467 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 MECP2P51608 486 aaKnown RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 PPIAP62937 165 aaKnown RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 HAGHLQ6PII5 290 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CORO6Q6QEF8 472 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 SLC16A9Q7RTY1 509 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 KDM8Q8N371 416 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 EID2Q8N6I1 236 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 SLC25A36Q96CQ1 311 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CMTM3Q96MX0 182 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 TSPAN32Q96QS1 320 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 SLC6A15Q9H2J7 730 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 TAS2R4Q9NYW5 299 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 MSRAQ9UJ68 235 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 MRPS18BQ9Y676 258 aaKnown RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CDC14CA4D256 554 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 GPR89AB7ZAQ6 455 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 H7C2Y5 167 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 SULT1C2O00338 296 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CELA2BP08218 269 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 TACSTD2P09758 323 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 GPR89BP0CG08 455 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 S1PR1P21453 382 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 AKR1C3P42330 323 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 GRK6P43250 576 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 RPL18Q07020 188 aaKnown RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 BPIFB2Q8N4F0 458 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 JAGN1Q8N5M9 183 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF321PQ8N8H1 164 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 OR1J4Q8NGS1 313 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 NT5CQ8TCD5 201 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 PHOSPHO1Q8TCT1 267 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 GPR148Q8TDV2 347 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 FBXO17Q96EF6 278 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 OR2M4Q96R27 311 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 ZFYVE21Q9BQ24 234 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 THAP10Q9P2Z0 257 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-202ENST00000524773 GRHPRQ9UBQ7 328 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 CYB5R1Q9UHQ9 305 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 VSIG4Q9Y279 399 aa11.9□□□□□ -0.5
CAPN1-202ENST00000524773 DENND4AQ7Z401 1863 aa11.9□□□□□ -0.51
CAPN1-202ENST00000524773 FREM3P0C091 2139 aa11.9□□□□□ -0.51
CAPN1-202ENST00000524773 TRBV5-5A0A0J9YX44 114 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 SIGLEC6O43699 453 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 AQP8O94778 261 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms