RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	XG	P55808	180 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	TMEM50B	P56557	158 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	RWDD2B	P57060	319 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	DSTN	P60981	165 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	VBP1	P61758	197 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	ERVK-25	P63136	954 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	ADARB1	P78563	741 aa	Known RBP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	KDSR	Q06136	332 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	KIR2DS3	Q14952	304 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	HLA-B	Q31612	363 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	MS4A18	Q3C1V0	323 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	FAM106A	Q4KMX7	169 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	CDKL4	Q5MAI5	379 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	ATP1A1-AS1	Q5TC04	95 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	FAM173B	Q6P4H8	233 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	RFWD3	Q6PCD5	774 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	RHBDF2	Q6PJF5	856 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	TMEM207	Q6UWW9	146 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	ERICH1	Q86X53	443 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	OR4N5	Q8IXE1	308 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	LRRC34	Q8IZ02	419 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	OR2L13	Q8N349	312 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	MARVELD2	Q8N4S9	558 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	FAM89B	Q8N5H3	189 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	CYB561A3	Q8NBI2	242 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	CATSPER1	Q8NEC5	780 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	DEFB124	Q8NES8	71 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	PLPPR1	Q8TBJ4	325 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	APOBEC4	Q8WW27	367 aa	Known RBP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	SDSL	Q96GA7	329 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	CNN2	Q99439	309 aa	Known RBP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	TSG101	Q99816	390 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	MAPKAP1	Q9BPZ7	522 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	C9orf16	Q9BUW7	83 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	GLIPR2	Q9H4G4	154 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	OR2S2	Q9NQN1	319 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	GPATCH2L	Q9NWQ4	482 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	RCOR3	Q9P2K3	495 aa	Predicted RBP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	DCDC2	Q9UHG0	476 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	SCML2	Q9UQR0	700 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	PPP2R2C	Q9Y2T4	447 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	HES2	Q9Y543	173 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	SMAD5-AS1	Q9Y6J3	95 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	TENM4	Q6N022	2769 aa		3.58	□□□□□ -1.84
PCM1-223	ENST00000524356	IGLV5-52	A0A0A0MRZ9	124 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	TRBV9	A0A0B4J1U6	114 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	IGLV9-49	A0A0B4J1Y8	123 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356		A0A1B0GW15	77 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356		E7EWF7	191 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	SIRPB1	O00241	398 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	RFXANK	O14593	260 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PPIH	O43447	177 aa	Known RBP	3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PSTPIP1	O43586	416 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	RBBP9	O75884	186 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	CDK2AP2	O75956	126 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	AP2A2	O94973	939 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	VAPB	O95292	243 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PLEKHA8P1	O95397	391 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	C1orf105	O95561	183 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PMS2P2	O95744	297 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	FADS2	O95864	444 aa	Known RBP	3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	GLUD1	P00367	558 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	JCHAIN	P01591	159 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	IGHG4	P01861	327 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	STS	P08842	583 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	OCM	P0CE72	109 aa	Predicted RBP	3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	CDH1	P12830	882 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PMCH	P20382	165 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	C4BPB	P20851	252 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	GABRR2	P28476	465 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	OR3A2	P47893	321 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PRPS1	P60891	318 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	EEF1A1	P68104	462 aa	Known RBP	3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	IL9R	Q01113	521 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	RAB40B	Q12829	278 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	SLAMF1	Q13291	335 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	TIGIT	Q495A1	244 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	RFTN2	Q52LD8	501 aa	Predicted RBP	3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	SOHLH1	Q5JUK2	328 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	FAM78A	Q5JUQ0	283 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	THEM4	Q5T1C6	240 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	EEF1A1P5	Q5VTE0	462 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF691	Q5VV52	312 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	RNLS	Q5VYX0	342 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	TIGD3	Q6B0B8	471 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	REEP3	Q6NUK4	255 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	CD300LG	Q6UXG3	332 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	LRRC31	Q6UY01	552 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	PLEKHG7	Q6ZR37	379 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	APTX	Q7Z2E3	356 aa	Known RBP	3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	APRG1	Q8IVJ8	170 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	KIRREL3	Q8IZU9	778 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	JAGN1	Q8N5M9	183 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF114	Q8NC26	417 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	OR1L3	Q8NH93	324 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	CCDC26	Q8TAB7	109 aa		3.57	□□□□□ -1.84
PCM1-223	ENST00000524356	NUBPL	Q8TB37	319 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms