RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ACSM5Q6NUN0 579 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 CLDN22Q8N7P3 220 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 IPCEF1Q8WWN9 437 aaPredicted RBP13.13□□□□□ -0.31
MRPS28-209ENST00000522987 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 SLC6A7Q99884 636 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 LRMDAQ9H2I8 198 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 CCNB1IP1Q9NPC3 277 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 G6PC2Q9NQR9 355 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 INIPQ9NRY2 104 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 UBAP1Q9NZ09 502 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 PCDHB10Q9UN67 800 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 C5orf49A4QMS7 147 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 CLDN25C9JDP6 229 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 WNT5AP41221 380 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 CRYBB2P43320 205 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF81P51508 661 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 MRPS11P82912 194 aaKnown RBP13.12□□□□□ -0.31
MRPS28-209ENST00000522987 PIN1Q13526 163 aaPredicted RBP13.12□□□□□ -0.31
MRPS28-209ENST00000522987 VMACQ2NL98 169 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 IGFN1Q86VF2 1251 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 DPP10Q8N608 796 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 SLC25A40Q8TBP6 338 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 CCL17Q92583 94 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 HDAC2Q92769 488 aaKnown RBP13.12□□□□□ -0.31
MRPS28-209ENST00000522987 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
MRPS28-209ENST00000522987 SGTBQ96EQ0 304 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 MPP4Q96JB8 637 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF426Q9BUY5 554 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 MRPL13Q9BYD1 178 aaKnown RBP13.12□□□□□ -0.31
MRPS28-209ENST00000522987 TMPRSS13Q9BYE2 586 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 RABEP2Q9H5N1 569 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 SLCO1C1Q9NYB5 712 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 UGT2A1Q9Y4X1 527 aa13.12□□□□□ -0.31
MRPS28-209ENST00000522987 LOC100509620A0A075B734 347 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 ZSCAN5BA6NJL1 495 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 FBP2O00757 339 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 MGRN1O60291 552 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 ENTPD5O75356 428 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-209ENST00000522987 SNAP29O95721 258 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 PTHP01270 115 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 IGHV1-46P01743 117 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 MT-ND1P03886 318 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 STOMP27105 288 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 GZMMP51124 257 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 LCN2P80188 198 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 HIST3H3Q16695 136 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 HFEQ30201 348 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 DCAF12L2Q5VW00 463 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 RFPL4BQ6ZWI9 263 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 MICU2Q8IYU8 434 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 C3orf56Q8N813 242 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 GEMIN6Q8WXD5 167 aaKnown RBP13.11□□□□□ -0.31
MRPS28-209ENST00000522987 NABP1Q96AH0 204 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 GAL3ST1Q99999 423 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 OR2J1Q9GZK6 312 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 KCNN2Q9H2S1 579 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 C1orf198Q9H425 327 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 INTS9Q9NV88 658 aaKnown RBP13.11□□□□□ -0.31
MRPS28-209ENST00000522987 DCAF16Q9NXF7 216 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 RIMS3Q9UJD0 308 aa13.11□□□□□ -0.31
MRPS28-209ENST00000522987 DOCK11Q5JSL3 2073 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 A0A0A6YYJ9 748 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 A0A0G2JND7 137 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 FUT4P22083 530 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 GCH1P30793 250 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 TEKQ02763 1124 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 INTS11Q5TA45 600 aaKnown RBP13.1□□□□□ -0.31
MRPS28-209ENST00000522987 NANOGP8Q6NSW7 305 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 SLC30A8Q8IWU4 369 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 TMEM239Q8WW34 195 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 POM121L2Q96KW2 1035 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 DCLRE1CQ96SD1 692 aaKnown RBP13.1□□□□□ -0.31
MRPS28-209ENST00000522987 SLC19A3Q9BZV2 496 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 PCDHAC1Q9H158 963 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 MSL2Q9HCI7 577 aa13.1□□□□□ -0.31
MRPS28-209ENST00000522987 A0A0G2JMP0 313 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 A0A0X1KG70 313 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 A0A1W2PPL8 197 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 TRIM77I1YAP6 450 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 SPRY1O43609 319 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-209ENST00000522987 NGFP01138 241 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 IGHV3-13P01766 116 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 MT-ND5P03915 603 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 ANPEPP15144 967 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 LAP3P28838 519 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 YAP1P46937 504 aaKnown RBP13.09□□□□□ -0.31
MRPS28-209ENST00000522987 GDI2P50395 445 aaKnown RBP13.09□□□□□ -0.31
MRPS28-209ENST00000522987 DAP3P51398 398 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms