RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MRASO14807 208 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ANGPT2O15123 496 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 PCDH7O60245 1069 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MRPL33O75394 65 aaKnown RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 IGLV2-14P01704 120 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 CRYAAP02489 173 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ANXA4P09525 319 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 TCN1P20061 433 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ACHEP22303 614 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 GCSHP23434 173 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 FRKP42685 505 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MAGEA8P43361 318 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 NUDT2P50583 147 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 P2RX1P51575 399 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 POU3F1Q03052 451 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 PTGR1Q14914 329 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 RAB39AQ14964 217 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 DUSP5Q16690 384 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 TBRG1Q3YBR2 411 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MMEL1Q495T6 779 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 SPDYE7PQ495Y7 208 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 RUNDC3AQ59EK9 446 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 PAGE3Q5JUK9 113 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 SAMD4BQ5PRF9 694 aaKnown RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ANXA8L1Q5VT79 327 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 DCAF12L2Q5VW00 463 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 NANOGP8Q6NSW7 305 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 C11orf87Q6NUJ2 197 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 LINGO2Q7L985 606 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 OVCH2Q7RTZ1 564 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF551Q7Z340 670 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ARPINQ7Z6K5 226 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MISPQ8IVT2 679 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 SAMD14Q8IZD0 417 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 FAM156AQ8NDB6 213 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 VPS37AQ8NEZ2 397 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 OR8J3Q8NGG0 315 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 PSMA8Q8TAA3 256 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 GPR151Q8TDV0 419 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 SCARB1Q8WTV0 552 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 LRTOMTQ8WZ04 291 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 RDH5Q92781 318 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 POP5Q969H6 163 aaKnown RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MCUR1Q96AQ8 359 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ARL5BQ96KC2 179 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 EGLN2Q96KS0 407 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 CCDC115Q96NT0 180 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 BBS4Q96RK4 519 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 C1orf50Q9BV19 199 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 RSPO3Q9BXY4 272 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 EBPLQ9BY08 206 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MRPL37Q9BZE1 423 aaKnown RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MUC13Q9H3R2 512 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 DENND2DQ9H6A0 471 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 REEP4Q9H6H4 257 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 RMND5AQ9H871 391 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 NANOGQ9H9S0 305 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 C3orf14Q9HBI5 128 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 DYNLRB1Q9NP97 96 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 SPAG4Q9NPE6 437 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 UBQLN4Q9NRR5 601 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 EMC3Q9P0I2 261 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 MYEF2Q9P2K5 600 aaKnown RBP5.61□□□□□ -1.51
SDCBP-210ENST00000522843 BAIAP2L1Q9UHR4 511 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 NOX1Q9Y5S8 564 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 IGHV2OR16-5A0A0B4J2B6 119 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 SULT2B1O00204 365 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 SCAMP2O15127 329 aaKnown RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 PPIHO43447 177 aaKnown RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 LGI1O95970 557 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 IGKV3-15P01624 115 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ERCC1P07992 297 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 IFI6P09912 130 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 SELEP16581 610 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 GPX2P18283 190 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 CDH2P19022 906 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 DDCP20711 480 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 MPGP29372 298 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 S100A3P33764 101 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 PCGF2P35227 344 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ALDH3B1P43353 468 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 GZMMP51124 257 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 SUMO3P55854 103 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 TMEM33P57088 247 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 MXRA7P84157 204 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF763Q0D2J5 394 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 CEACAM7Q14002 265 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 HEPACAMQ14CZ8 416 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 MAD2L1BPQ15013 274 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 QPRTQ15274 297 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 KLHL26Q53HC5 615 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF311Q5JNZ3 666 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 SPANXN4Q5MJ08 99 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 AVPI1Q5T686 147 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 C1QTNF12Q5T7M4 302 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 AP1ARQ63HQ0 302 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 C3orf33Q6P1S2 294 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 CASP12Q6UXS9 341 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 RBMS3Q6XE24 437 aaKnown RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 LRP11Q86VZ4 500 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms