RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ANAPC11Q9NYG5 84 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 ING4Q9UNL4 249 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC17A4Q9Y2C5 497 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 CEMIPQ8WUJ3 1361 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 UHRF1BP1Q6BDS2 1440 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 SCAPERQ9BY12 1400 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 FANCAO15360 1455 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 MAP3K4Q9Y6R4 1608 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 BIVM-ERCC5R4GMW8 1640 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 KBTBD11-OT1A0A1B0GTJ5 212 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 A0A1B0GTQ1 180 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 LRRIQ4A6NIV6 560 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 CDC7O00311 574 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 SCAMP2O15127 329 aaKnown RBP3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 GPX4P36969 197 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC1A1P43005 524 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 RORCP51449 518 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 CRISP1P54107 249 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF726P1Q15940 193 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 GUCA2BQ16661 112 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 ANKRD26P1Q6NSI1 321 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 DUX4L9Q6RFH8 374 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 CENPQQ7L2Z9 268 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 PEX26Q7Z412 305 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 LUZP2Q86TE4 346 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 C8orf31Q8N9H6 132 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 RHEBL1Q8TAI7 183 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 MARC2Q969Z3 335 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 CCDC126Q96EE4 140 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 PHYHIPLQ96FC7 376 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 AURKBQ96GD4 344 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 PKNOX2Q96KN3 472 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 NRTNQ99748 197 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 RASL11BQ9BPW5 248 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 ELOVL6Q9H5J4 265 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 LYRM4Q9HD34 91 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 PEF1Q9UBV8 284 aaKnown RBP3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 CLN8Q9UBY8 286 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 TRAPPC4Q9Y296 219 aa3.09□□□□□ -1.91
HMGB1P1-201ENST00000522557 FHOD3Q2V2M9 1422 aa3.09□□□□□ -1.92
HMGB1P1-201ENST00000522557 TRAPPC8Q9Y2L5 1435 aa3.09□□□□□ -1.92
HMGB1P1-201ENST00000522557 UGGT2Q9NYU1 1516 aa3.09□□□□□ -1.92
HMGB1P1-201ENST00000522557 CUL7Q14999 1698 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 PPRC1Q5VV67 1664 aaKnown RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 GLYATL1P3A0A0U1RQE8 302 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 PLAC8L1A1L4L8 177 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 GJE1A6NN92 205 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 K7EMT4 169 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 TNFSF13O75888 250 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ERLIN2O94905 339 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 INSP01308 110 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 IGHV4-34P06331 123 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 SERPINE2P07093 398 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 CSF3P09919 207 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 SMIM10L1P0DMW3 83 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ZNF24P17028 368 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 AK4P27144 223 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 HRH1P35367 487 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 NUDT1P36639 197 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 SERPINB5P36952 375 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 CDKN1BP46527 198 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 MRPL19P49406 292 aaKnown RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 NCBP2P52298 156 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 WNT4P56705 351 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 YWHAGP61981 247 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 AQP6Q13520 282 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 PSG5Q15238 335 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 SOHLH1Q5JUK2 328 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 FRMPD2BQ6IN97 320 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 LCN12Q6JVE5 192 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 CNIH2Q6PI25 160 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ZNF621Q6ZSS3 439 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 SSX9Q7RTT3 188 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 EID2Q8N6I1 236 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 Q8N7P7 452 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 BPIFCQ8NFQ6 507 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 OR2L5Q8NG80 312 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 FAM81AQ8TBF8 368 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 FANK1Q8TC84 345 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ZNF707Q96C28 371 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 PIK3IP1Q96FE7 263 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 MED8Q96G25 268 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 SMIM10Q96HG1 83 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 TSNARE1Q96NA8 513 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 COL21A1Q96P44 957 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 OSBPL10Q9BXB5 764 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 HES7Q9BYE0 225 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 MRPL37Q9BZE1 423 aaKnown RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 CTPS2Q9NRF8 586 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 PDP1Q9P0J1 537 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ZNF225Q9UK10 706 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 CHTOPQ9Y3Y2 248 aaKnown RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 MAGI2Q86UL8 1455 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ZCCHC11Q5TAX3 1644 aaKnown RBP3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 ADAMTSL3P82987 1691 aa3.08□□□□□ -1.92
HMGB1P1-201ENST00000522557 A0A0B4J2A0 478 aa3.07□□□□□ -1.92
HMGB1P1-201ENST00000522557 IGHV3-64DA0A0J9YX35 117 aa3.07□□□□□ -1.92
HMGB1P1-201ENST00000522557 LRRIQ3A6PVS8 624 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P1-201ENST00000522557 STAG3L3P0CL85 134 aa3.07□□□□□ -1.92
HMGB1P1-201ENST00000522557 CT45A6P0DMU7 189 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms