RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TP63Q9H3D4 680 aaPredicted RBP18.89■□□□□ 0.61
R3HCC1-208ENST00000522012 CRLF2Q9HC73 371 aa18.89■□□□□ 0.61
R3HCC1-208ENST00000522012 EXOSC1Q9Y3B2 195 aaKnown RBP18.89■□□□□ 0.61
R3HCC1-208ENST00000522012 EMC9Q9Y3B6 208 aa18.89■□□□□ 0.61
R3HCC1-208ENST00000522012 DAPL1A0PJW8 107 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 OR6C65A6NJZ3 312 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 TRIM64CA6NLI5 447 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 C12orf71A8MTZ7 269 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 TFP02787 698 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 CDAP32320 146 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 ETV1P50549 477 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF84P51523 738 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF133P52736 654 aaPredicted RBP18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 EMX1Q04741 257 aaPredicted RBP18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 MEP1BQ16820 701 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 C10orf128Q5T292 105 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 LHFPL3Q86UP9 236 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 UBE2J2Q8N2K1 259 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 RPRMLQ8N4K4 120 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 CNEP1R1Q8N9A8 125 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 SLC26A10Q8NG04 563 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 OR6N2Q8NGY6 317 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 ALKBH3Q96Q83 286 aaPredicted RBP18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 LINC00470Q9BZP3 86 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 MARCH7Q9H992 704 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 SLC7A10Q9NS82 523 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 MRPL22Q9NWU5 206 aaKnown RBP18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 CLEC2DQ9UHP7 191 aa18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 FASNP49327 2511 aaKnown RBP18.88■□□□□ 0.61
R3HCC1-208ENST00000522012 DNAJC13O75165 2243 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF593O00488 134 aaPredicted RBP18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 IGHA1P01876 353 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 GAAP10253 952 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF823P16415 610 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 GUCA1AP43080 201 aaPredicted RBP18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 ADAM8P78325 824 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 IRF3Q14653 427 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 NEDD8Q15843 81 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 LINGO2Q7L985 606 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 GPR35Q9HC97 309 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 VCX3AQ9NNX9 186 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 UPB1Q9UBR1 384 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 SH3BGRL2Q9UJC5 107 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 TINAGQ9UJW2 476 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 ERGIC3Q9Y282 383 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 UGT2A1Q9Y4X1 527 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 PIEZO2Q9H5I5 2752 aa18.87■□□□□ 0.61
R3HCC1-208ENST00000522012 OR2T7P0C7T2 308 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 ACTC1P68032 377 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 ACTA1P68133 377 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 ROR2Q01974 943 aaKnown RBP18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 GUSBP1Q15486 140 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 RIPPLY2Q5TAB7 128 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 OR2T27Q8NH04 317 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 C11orf40Q8WZ69 217 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF837Q96EG3 531 aaPredicted RBP18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 BBC3Q96PG8 261 aaPredicted RBP18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 ACOT13Q9NPJ3 140 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 ERVK13-1Q9NX77 482 aa18.86■□□□□ 0.61
R3HCC1-208ENST00000522012 BOD1L1Q8NFC6 3051 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 A0A1W2PQL4 384 aaPredicted RBP18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 TOXO94900 526 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 IL2RAP01589 272 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 SCG5P05408 212 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 SPARCP09486 303 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 PCMT1P22061 227 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 RPS27P42677 84 aaKnown RBP18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 KIR2DL2P43627 348 aaPredicted RBP18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 OR3A2P47893 321 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 FOXF2Q12947 444 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 BLMHQ13867 455 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 SGCAQ16586 387 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 CEACAM16Q2WEN9 425 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 RNLSQ5VYX0 342 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 DPY19L4Q7Z388 723 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 ST6GALNAC3Q8NDV1 305 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 OR10H5Q8NGA6 315 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 HTRA1Q92743 480 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 TTYH2Q9BSA4 534 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 JAM3Q9BX67 310 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 YIPF3Q9GZM5 350 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 INPP5EQ9NRR6 644 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 PRSS50Q9UI38 385 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 KIAA1549Q9HCM3 1950 aa18.85■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF587BE7ETH6 402 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF670-ZNF695F2Z2N8 137 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 MYL12BO14950 172 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 PTHP01270 115 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 HRGP04196 525 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 TFAP2AP05549 437 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 LIMS3P0CW19 117 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 LIMS4P0CW20 117 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 TMIGD3P0DMS9 266 aaPredicted RBP18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 TIMP3P35625 211 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 ENTPD1P49961 510 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 CDC20BQ86Y33 519 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 CDADC1Q9BWV3 514 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 EMC7Q9NPA0 242 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 COPS3Q9UNS2 423 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 GLI4P10075 376 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms