RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 MMP15P51511 669 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 PCBP3P57721 371 aaKnown RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 LCN2P80188 198 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 CDK6Q00534 326 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 FADDQ13158 208 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF74Q16587 644 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 HIST3H3Q16695 136 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 GCNT6Q5T4J0 391 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 RGS7BPQ6MZT1 257 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 DLEU7Q6UYE1 221 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 SLC35D2Q76EJ3 337 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 NET1Q7Z628 596 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 CLDN22Q8N7P3 220 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 DEFB108BQ8NET1 73 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 OR5J2Q8NH18 312 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 OR6X1Q8NH79 312 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF418Q8TF45 676 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 NABP1Q96AH0 204 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 NMD3Q96D46 503 aaKnown RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 SLC47A1Q96FL8 570 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 SEPHS2Q99611 448 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 ARHGDIGQ99819 225 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 PRSS27Q9BQR3 290 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 CPPED1Q9BRF8 314 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 TMEM43Q9BTV4 400 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF426Q9BUY5 554 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 MRPL13Q9BYD1 178 aaKnown RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 PARD6BQ9BYG5 372 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 CENPHQ9H3R5 247 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 POFUT1Q9H488 388 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF385DQ9H6B1 395 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 MEPEQ9NQ76 525 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 RPS6KB2Q9UBS0 482 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 TESQ9UGI8 421 aaKnown RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 LEF1Q9UJU2 399 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-210ENST00000521646 UGT2A1Q9Y4X1 527 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 GMEB1Q9Y692 573 aa9.36□□□□□ -0.91
CSMD1-210ENST00000521646 IGHV1-69-2A0A0G2JMI3 117 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 TRPC5OSA6NMA1 111 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 CPSF4LA6NMK7 179 aaKnown RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 TRAPPC2LH3BP13 241 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 KPNA4O00629 521 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 UBDO15205 165 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 DHHO43323 396 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 UBOX5O94941 541 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 UBL3O95164 117 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 CH25HO95992 272 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 QDPRP09417 244 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 ASAH2BP0C7U1 165 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 GPX2P18283 190 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 FUT1P19526 365 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 CD247P20963 164 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 MRPL19P49406 292 aaKnown RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 RGS8P57771 180 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 GALK2Q01415 458 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 FMODQ06828 376 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 SRSF4Q08170 494 aaKnown RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 SCARB2Q14108 478 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 ACSM5Q6NUN0 579 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 SHQ1Q6PI26 577 aaKnown RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 EPGNQ6UW88 154 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 C5orf46Q6UWT4 87 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 RFPL4BQ6ZWI9 263 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 PIWIL3Q7Z3Z3 882 aaKnown RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 JAZF1Q86VZ6 243 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 SIGLECL1Q8N7X8 197 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 SGMS2Q8NHU3 365 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 IPCEF1Q8WWN9 437 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 GEMIN6Q8WXD5 167 aaKnown RBP9.35□□□□□ -0.91
CSMD1-210ENST00000521646 MCHR2Q969V1 340 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF416Q9BWM5 594 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 ASPNQ9BXN1 380 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 FAM53CQ9NYF3 392 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF69Q9UC07 566 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
CSMD1-210ENST00000521646 DNAJC9-AS1A6NH13 148 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 ZNF726A6NNF4 738 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 TRIM77I1YAP6 450 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 SPRY3O43610 288 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 AKAP8O43823 692 aaKnown RBP9.34□□□□□ -0.91
CSMD1-210ENST00000521646 PRSS23O95084 383 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 SLC2A10O95528 541 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 SNAP29O95721 258 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 NGFP01138 241 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 SCG5P05408 212 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 LCKP06239 509 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 PCMT1P22061 227 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 UCP2P55851 309 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 KLF3P57682 345 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-210ENST00000521646 RBBP4Q09028 425 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 ENTPD8Q5MY95 495 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 UGT2A3Q6UWM9 527 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 LRRC18Q8N456 261 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 C10orf53Q8N6V4 93 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 ICA1LQ8NDH6 482 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 PFN4Q8NHR9 129 aa9.34□□□□□ -0.91
CSMD1-210ENST00000521646 SYNPRQ8TBG9 265 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms