RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 REP15Q6BDI9 236 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SPINK14Q6IE38 97 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SLC25A25Q6KCM7 469 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 NANOGP8Q6NSW7 305 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 NPSR1Q6W5P4 371 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 HACD2Q6Y1H2 254 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 RTL4Q6ZR62 310 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 Q6ZS92 163 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 TRPM8Q7Z2W7 1104 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 ARPINQ7Z6K5 226 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 KRT77Q7Z794 578 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 RNF130Q86XS8 419 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 MSRB3Q8IXL7 192 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 PRR22Q8IZ63 422 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SLC34A3Q8N130 599 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF611Q8N823 705 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 BCORP1Q8N888 145 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 COX18Q8N8Q8 333 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 MDS2Q8NDY4 140 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 CHDHQ8NE62 594 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 CATSPER1Q8NEC5 780 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 OR5AK3PQ8NH89 298 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 PNPT1Q8TCS8 783 aaKnown RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SPPL2AQ8TCT8 520 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 GPR151Q8TDV0 419 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 ZFP90Q8TF47 636 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 CDS1Q92903 461 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 HGDQ93099 445 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 TMBIM1Q969X1 311 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 LRRC58Q96CX6 371 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SPACA9Q96E40 222 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 OMA1Q96E52 524 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SLC47A1Q96FL8 570 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 AURKBQ96GD4 344 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 GMPPAQ96IJ6 420 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SLC35G5Q96KT7 338 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 POM121L2Q96KW2 1035 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 COL21A1Q96P44 957 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 MS4A10Q96PG2 267 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 OR7D2Q96RA2 312 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 GAL3ST4Q96RP7 486 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SECISBP2Q96T21 854 aaKnown RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SDF2Q99470 211 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SEPHS2Q99611 448 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 CGREF1Q99674 301 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SH3GL1Q99961 368 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 HOPXQ9BPY8 73 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 PYGO2Q9BRQ0 406 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 MCRIP2Q9BUT9 160 aaKnown RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 OR51I1Q9H343 314 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 NANOGQ9H9S0 305 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SH2D2AQ9NP31 389 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF71Q9NQZ8 489 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 OLAHQ9NV23 265 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 EXD2Q9NVH0 621 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 GID8Q9NWU2 228 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 HPF1Q9NWY4 346 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 THUMPD1Q9NXG2 353 aaKnown RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 CNIH4Q9P003 139 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 VAPAQ9P0L0 249 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 LIPT1Q9Y234 373 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 TP53TG5Q9Y2B4 290 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 AP3M1Q9Y2T2 418 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 KLF13Q9Y2Y9 288 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 OR10H1Q9Y4A9 318 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 SPIN1Q9Y657 262 aaPredicted RBP2.78□□□□□ -1.96
VPS13B-209ENST00000521559 KCNE3Q9Y6H6 103 aa2.78□□□□□ -1.96
VPS13B-209ENST00000521559 TP53BP1Q12888 1972 aaPredicted RBP2.78□□□□□ -1.97
VPS13B-209ENST00000521559 WDFY4Q6ZS81 3184 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF292O60281 2723 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TEX13DA0A0J9YY54 714 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NPIPB9F8W1W9 429 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 KLRC4-KLRK1H3BQV0 150 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FXYD1O00168 92 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 HMGN4O00479 90 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 XRCC3O43542 346 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NME2P1O60361 137 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FADS1O60427 444 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FCMRO60667 390 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 UGT2B11O75310 529 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 STX11O75558 287 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 SNX4O95219 450 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 UTS2O95399 124 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 F10P00742 488 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 IGKV1D-16P01601 117 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 P04436 131 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ATP6V1C1P21283 382 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TBXA2RP21731 343 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CALB2P22676 271 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 DNASE1P24855 282 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 IL12BP29460 328 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 SLC6A6P31641 620 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 GABRA5P31644 462 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CEACAM8P31997 349 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CASP3P42574 277 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CRATP43155 626 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TMED10P49755 219 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TNFSF10P50591 281 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 GZMMP51124 257 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 MNAT1P51948 309 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms