RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SGK2Q9HBY8 427 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 KIAA1257Q9ULG3 409 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 PACSIN2Q9UNF0 486 aaPredicted RBP3.14□□□□□ -1.91
SKP1-208ENST00000521216 GAPVD1Q14C86 1478 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 NFASCO94856 1347 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 MROH5Q6ZUA9 1318 aa3.14□□□□□ -1.91
SKP1-208ENST00000521216 DHX57Q6P158 1386 aaKnown RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 ANKRD36BQ8N2N9 1353 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 ABCC11Q96J66 1382 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 FHAD1B1AJZ9 1412 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 IGKV2-28A0A075B6P5 120 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 LOC105371267A0A1B0GV96 52 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 HAS3O00219 553 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 CD5LO43866 347 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 PFDN1O60925 122 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 SURF6O75683 361 aaKnown RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 OR5F1O95221 314 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 IGKV2D-28P01615 120 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 APOEP02649 317 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 CAPN1P07384 714 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 ZNF30P17039 623 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 PRKACBP22694 351 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 CFL1P23528 166 aaKnown RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 GPR6P46095 362 aaPredicted RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 ZNF136P52737 540 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.913e-16■■■■■ 72.7
SKP1-208ENST00000521216 PLTPP55058 493 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 DNAJC3Q13217 504 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 GNA13Q14344 377 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 AADACL4Q5VUY2 407 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 TTC23LQ6PF05 361 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 LRRC74BQ6ZQY2 392 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 PCP2Q8IVA1 136 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 C12orf56Q8IXR9 622 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 SAXO1Q8IYX7 474 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 PUSL1Q8N0Z8 303 aaKnown RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 EIF1ADQ8N9N8 165 aaKnown RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 TRPV1Q8NER1 839 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 OR52K1Q8NGK4 314 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 AURKBQ96GD4 344 aaPredicted RBP3.13□□□□□ -1.91
SKP1-208ENST00000521216 CNDP1Q96KN2 507 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 RARRES2Q99969 163 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 FAIM2Q9BWQ8 316 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 GABARAPL3Q9BY60 117 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 HAUS4Q9H6D7 363 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 LRRC40Q9H9A6 602 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 NLRP1Q9C000 1473 aa3.13□□□□□ -1.91
SKP1-208ENST00000521216 KIF24Q5T7B8 1368 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ERBINQ96RT1 1412 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 CEP164Q9UPV0 1460 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 TRAV6A0A075B6T7 132 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 H3BQV1 296 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 GOLGA8RI6L899 631 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 L7N2F9 121 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 AP3B1O00203 1094 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 FOXE1O00358 373 aaPredicted RBP3.12□□□□□ -1.91
SKP1-208ENST00000521216 DLGAP1O14490 977 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ZNF324O75467 553 aaPredicted RBP3.12□□□□□ -1.91
SKP1-208ENST00000521216 FLOT1O75955 427 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 NPPAP01160 153 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 IGLV2-23P01705 113 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 EIF2S2P20042 333 aaKnown RBP3.12□□□□□ -1.91
SKP1-208ENST00000521216 FDFT1P37268 417 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 GYG1P46976 350 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 NPBWR2P48146 333 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 HSPA13P48723 471 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 HMGCS1Q01581 520 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 STK38Q15208 465 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 MOGQ16653 247 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 Q3ZCU0 254 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 LINC00173Q6ZV60 143 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 BZW1Q7L1Q6 419 aaKnown RBP3.12□□□□□ -1.91
SKP1-208ENST00000521216 TGIF2LXQ8IUE1 241 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ZNF679Q8IYX0 411 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ZCCHC7Q8N3Z6 543 aaKnown RBP3.12□□□□□ -1.91
SKP1-208ENST00000521216 CYB561D1Q8N8Q1 229 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 Q8N976 141 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ATP6V1G3Q96LB4 118 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 BMFQ96LC9 184 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 CCDC42Q96M95 316 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 FAM192AQ9GZU8 254 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 MFFQ9GZY8 342 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ANKRD19PQ9H560 264 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 NIPAL2Q9H841 368 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 TM9SF3Q9HD45 589 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 SDHAF3Q9NRP4 125 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 EXTL2Q9UBQ6 330 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 VANGL2Q9ULK5 521 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 HPCAL4Q9UM19 191 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 DDX19BQ9UMR2 479 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 FAM32AQ9Y421 112 aaKnown RBP3.12□□□□□ -1.91
SKP1-208ENST00000521216 ASB3Q9Y575 518 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 NPTNQ9Y639 398 aa3.12□□□□□ -1.91
SKP1-208ENST00000521216 ZNFX1Q9P2E3 1918 aaKnown RBP3.11□□□□□ -1.91
SKP1-208ENST00000521216 IGKV1D-13A0A0B4J2D9 117 aa3.11□□□□□ -1.91
SKP1-208ENST00000521216 LOC100653049A0A140TA62 436 aa3.11□□□□□ -1.91
SKP1-208ENST00000521216 SYCE1LA8MT33 242 aa3.11□□□□□ -1.91
SKP1-208ENST00000521216 GOLGA8KD6RF30 607 aa3.11□□□□□ -1.91
SKP1-208ENST00000521216 GOLGA8TH3BQL2 631 aa3.11□□□□□ -1.91
SKP1-208ENST00000521216 GOLGA8MH3BSY2 632 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms