RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OSTNP61366 133 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 VBP1P61758 197 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FLI1Q01543 452 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CDH17Q12864 832 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 NPRL3Q12980 569 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 STX5Q13190 355 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 IL18R1Q13478 541 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PDE7AQ13946 482 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 P2RY14Q15391 338 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GRK1Q15835 563 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF79Q15937 498 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF239Q16600 458 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PCK2Q16822 640 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TMEM44Q2T9K0 475 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GLYR1Q49A26 553 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PABPC1L2AQ5JQF8 200 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TPRG1LQ5T0D9 272 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 METTL11BQ5VVY1 283 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 MLIPQ5VWP3 458 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SULT1C3Q6IMI6 304 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 RHBDD2Q6NTF9 364 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SCYL2Q6P3W7 929 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 KDELC1Q6UW63 502 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TEX261Q6UWH6 196 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZYG11AQ6WRX3 759 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 Q6ZR54 194 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PID1Q7Z2X4 250 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CEACAM19Q7Z692 300 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DHFR2Q86XF0 187 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CCDC71Q8IV32 467 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DEFB106AQ8N104 65 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF567Q8N184 647 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 LIX1Q8N485 282 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 YIPF7Q8N8F6 280 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF557Q8N988 423 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZBTB44Q8NCP5 570 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DUSP18Q8NEJ0 188 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 OR52E4Q8NGH9 312 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 OR4Q3Q8NH05 313 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 MCFD2Q8NI22 146 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SLC22A8Q8TCC7 542 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SPPL2BQ8TCT7 592 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 RNF139Q8WU17 664 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DNAJA4Q8WW22 397 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CYGBQ8WWM9 190 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 HGDQ93099 445 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ROPN1LQ96C74 230 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 C19orf60Q96EN9 201 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 C11orf24Q96F05 449 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CERS2Q96G23 380 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 RBM18Q96H35 190 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CPB2Q96IY4 423 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CAPNS2Q96L46 248 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FOPNLQ96NB1 174 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 OR5M11Q96RB7 305 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GPR22Q99680 433 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PELOQ9BRX2 385 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TRIM62Q9BVG3 475 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 BCL2L14Q9BZR8 327 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SLC19A3Q9BZV2 496 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 UCK2Q9BZX2 261 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ILKAPQ9H0C8 392 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TRPV6Q9H1D0 765 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DCSTAMPQ9H295 470 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SPNS1Q9H2V7 528 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 LIME1Q9H400 295 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DHX35Q9H5Z1 703 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 MEAF6Q9HAF1 191 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ELL3Q9HB65 397 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 NMRAL1Q9HBL8 299 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 MCCC2Q9HCC0 563 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CSNK1G1Q9HCP0 422 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FANCFQ9NPI8 374 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 IFT46Q9NQC8 304 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ABCB10Q9NRK6 738 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 RGS18Q9NS28 235 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GPATCH2LQ9NWQ4 482 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 MRPL39Q9NYK5 338 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ATP6V1HQ9UI12 483 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF229Q9UJW7 825 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 COPS3Q9UNS2 423 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ERVW-1Q9UQF0 538 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PDE10AQ9Y233 779 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GINS2Q9Y248 185 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CAB39Q9Y376 341 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FBXO7Q9Y3I1 522 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 HES2Q9Y543 173 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 U3KQ87 197 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 NUP214P35658 2090 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SBF1O95248 1867 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 A0A1B0GWJ7 208 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 A0A1W2PP18 115 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 KRT87PA6NCN2 255 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 C5orf51A6NDU8 294 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 FOXI3A8MTJ6 420 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 F8W036 122 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 M0R3G1 203 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 DNASE2O00115 360 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 UBXN8O00124 270 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PRMT5O14744 637 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms