RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 CWH43Q9H720 699 aa3.14□□□□□ -1.91
NPM1-206ENST00000519955 CTNNA3Q9UI47 895 aa3.14□□□□□ -1.91
NPM1-206ENST00000519955 STARD10Q9Y365 291 aa3.14□□□□□ -1.91
NPM1-206ENST00000519955 COL4A4P53420 1690 aaPredicted RBP3.14□□□□□ -1.91
NPM1-206ENST00000519955 SLIT3O75094 1523 aa3.14□□□□□ -1.91
NPM1-206ENST00000519955 A0A1B0GVX0 72 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 A0A1W2PP18 115 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 F6UB75 175 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 CDC7O00311 574 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 BET1O15155 118 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 EEDO75530 441 aaKnown RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 AIFM1O95831 613 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 MRPL3P09001 348 aaKnown RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 GNAO1P09471 354 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 CISD3P0C7P0 127 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 NAMPTP43490 491 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 CCNHP51946 323 aaPredicted RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 TWF1Q12792 350 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 LY6G6FQ5SQ64 297 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 ANKRD22Q5VYY1 191 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 ZNF836Q6ZNA1 936 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 ASCL5Q7RTU5 278 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 ABHD12BQ7Z5M8 362 aaPredicted RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 BIVMQ86UB2 503 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 OR5W2Q8NH69 310 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 ING4Q9UNL4 249 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 PSG8Q9UQ74 426 aa3.13□□□□□ -1.91
NPM1-206ENST00000519955 CSDC2Q9Y534 153 aaKnown RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 YTHDF2Q9Y5A9 579 aaKnown RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 MRPS18BQ9Y676 258 aaKnown RBP3.13□□□□□ -1.91
NPM1-206ENST00000519955 GABARAPO95166 117 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 SLC25A14O95258 325 aaPredicted RBP3.12□□□□□ -1.91
NPM1-206ENST00000519955 CRYGBP07316 175 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 PSMC3P17980 439 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 HNRNPH3P31942 346 aaKnown RBP3.12□□□□□ -1.91
NPM1-206ENST00000519955 CDKN2BP42772 138 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 RAP1AP62834 184 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 ACTG2P63267 376 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 CCNJQ5T5M9 372 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 TTC5Q8N0Z6 440 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 NOXO1Q8NFA2 376 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 FRZBQ92765 325 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 ZNF430Q9H8G1 570 aaPredicted RBP3.12□□□□□ -1.91
NPM1-206ENST00000519955 PISDQ9UG56 409 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 HPCAL4Q9UM19 191 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 CNTNAP1P78357 1384 aa3.12□□□□□ -1.91
NPM1-206ENST00000519955 TMEM150BA6NC51 233 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 IGHV1-8P0DP01 117 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 FOXN2P32314 431 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 PMELP40967 661 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 TNNT2P45379 298 aaPredicted RBP3.11□□□□□ -1.91
NPM1-206ENST00000519955 CSNK1A1P48729 337 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 ARG2P78540 354 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 THEM4Q5T1C6 240 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 ANKRD26P1Q6NSI1 321 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 Q6ZR03 302 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 NIPA1Q7RTP0 329 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 TAS2R42Q7RTR8 314 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 FAM228AQ86W67 206 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 CCDC126Q96EE4 140 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 PDXPQ96GD0 296 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 SPIN2AQ99865 258 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 SPIN2BQ9BPZ2 258 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 SLC25A2Q9BXI2 301 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 LSM7Q9UK45 103 aaKnown RBP3.11□□□□□ -1.91
NPM1-206ENST00000519955 GOLT1BQ9Y3E0 138 aa3.11□□□□□ -1.91
NPM1-206ENST00000519955 MYO10Q9HD67 2058 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 IGHV5-10-1A0A0J9YXX1 117 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 SPECC1L-ADORA2AF8WAN1 911 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 CLIC3O95833 236 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 HLA-DPB1P04440 258 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 RHOXF2BP0C7M4 288 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 CCNB1P14635 433 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 CEACAM6P40199 344 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 AQP2P41181 271 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 NSG1P42857 185 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 HMGN5P82970 282 aaKnown RBP3.1□□□□□ -1.91
NPM1-206ENST00000519955 MAB21L1Q13394 359 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 ZSCAN26Q16670 478 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 RABL6Q3YEC7 729 aaPredicted RBP3.1□□□□□ -1.91
NPM1-206ENST00000519955 SPECC1LQ69YQ0 1117 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 NCCRP1Q6ZVX7 275 aaPredicted RBP3.1□□□□□ -1.91
NPM1-206ENST00000519955 SLC22A9Q8IVM8 553 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 OR56B2PQ8NGI1 322 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 AKR7LQ8NHP1 331 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 ABHD3Q8WU67 409 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 TM4SF18Q96CE8 201 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 PKNOX2Q96KN3 472 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 SERPINB12Q96P63 405 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 ATP5SQ99766 215 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 NTN4Q9HB63 628 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 HMG20AQ9NP66 347 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 UVRAGQ9P2Y5 699 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 IKBKGQ9Y6K9 419 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 MAPK8IP3Q9UPT6 1336 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 USP47Q96K76 1375 aa3.1□□□□□ -1.91
NPM1-206ENST00000519955 PIKFYVEQ9Y2I7 2098 aa3.09□□□□□ -1.91
NPM1-206ENST00000519955 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
NPM1-206ENST00000519955 ZNF816-ZNF321PA0A0X1KG74 233 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms