RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 APLNRP35414 380 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 GPR6P46095 362 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-220ENST00000519767 CDH15P55291 814 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 HSF2Q03933 536 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 CR1LQ2VPA4 569 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 PCGF3Q3KNV8 242 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 THEM4Q5T1C6 240 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 TMEM154Q6P9G4 183 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 PAQR4Q8N4S7 273 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-220ENST00000519767 RCN3Q96D15 328 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 NMD3Q96D46 503 aaKnown RBP21.7■■□□□ 1.06
VEGFA-220ENST00000519767 ALG12Q9BV10 488 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 FNDC11Q9BVV2 318 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 REPIN1Q9BWE0 567 aaKnown RBP21.7■■□□□ 1.06
VEGFA-220ENST00000519767 CCNB1IP1Q9NPC3 277 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 HINT3Q9NQE9 182 aaKnown RBP21.7■■□□□ 1.06
VEGFA-220ENST00000519767 TAAR3PQ9P1P4 343 aa21.7■■□□□ 1.06
VEGFA-220ENST00000519767 IFNW1P05000 195 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 NAT2P11245 290 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 IFI30P13284 250 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 GUCA1AP43080 201 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-220ENST00000519767 RPL27P61353 136 aaKnown RBP21.69■■□□□ 1.06
VEGFA-220ENST00000519767 GUCY1A3Q02108 690 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 TRIP10Q15642 601 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 FAM205BPQ63HN1 556 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 UNQ6126/PRO20091Q6UXV3 157 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 RNF113BQ8IZP6 322 aaKnown RBP21.69■■□□□ 1.06
VEGFA-220ENST00000519767 SNX33Q8WV41 574 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 HOPXQ9BPY8 73 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-220ENST00000519767 ZNF416Q9BWM5 594 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 CMTM6Q9NX76 183 aa21.69■■□□□ 1.06
VEGFA-220ENST00000519767 CUBNO60494 3623 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 B4DSR2 109 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 CCDC22O60826 627 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 SLC2A10O95528 541 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 MT-ND5P03915 603 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 CD47Q08722 323 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 SGCAQ16586 387 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 HSP90B2PQ58FF3 399 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 PABPC1L2AQ5JQF8 200 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 FAM27BQ5VT28 67 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 SLC25A47Q6Q0C1 308 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 IL17RELQ6ZVW7 336 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 SLC15A3Q8IY34 581 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 C1orf174Q8IYL3 243 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 CPEB3Q8NE35 698 aaKnown RBP21.68■■□□□ 1.06
VEGFA-220ENST00000519767 HDAC2Q92769 488 aaKnown RBP21.68■■□□□ 1.06
VEGFA-220ENST00000519767 NKIRAS2Q9NYR9 191 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 ARMCX1Q9P291 453 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 EIF3KQ9UBQ5 218 aaKnown RBP21.68■■□□□ 1.06
VEGFA-220ENST00000519767 UGT2A1Q9Y4X1 527 aa21.68■■□□□ 1.06
VEGFA-220ENST00000519767 C17orf100A8MU93 164 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 CLPTM1O96005 669 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 SAGP10523 405 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-220ENST00000519767 STOMP27105 288 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 CDAP32320 146 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 DVL1P1P54792 670 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-220ENST00000519767 LIPEQ05469 1076 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 PRKCDQ05655 676 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 TRAM2Q15035 370 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 OFCC1Q8IZS5 231 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 NSMAFQ92636 917 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 RACGAP1Q9H0H5 632 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 EFCAB1Q9HAE3 211 aa21.67■■□□□ 1.06
VEGFA-220ENST00000519767 A6NIZ1 184 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 NDUFAB1O14561 156 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 GSTA4O15217 222 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 PIP5K1CO60331 668 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 IGHMP01871 453 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 CTXN1P60606 82 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 RAP1BP61224 184 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 RAP1AP62834 184 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 TEKQ02763 1124 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 OAFQ86UD1 273 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 NRMQ8IXM6 262 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 ALDH16A1Q8IZ83 802 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 POU5F2Q8N7G0 328 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 GEMIN6Q8WXD5 167 aaKnown RBP21.66■■□□□ 1.06
VEGFA-220ENST00000519767 NABP1Q96AH0 204 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 OR51B6Q9H340 312 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 ZNF275Q9NSD4 429 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-220ENST00000519767 ZNF446Q9NWS9 450 aa21.66■■□□□ 1.06
VEGFA-220ENST00000519767 CXCR6O00574 342 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 PPIHO43447 177 aaKnown RBP21.65■■□□□ 1.06
VEGFA-220ENST00000519767 IGHV3-13P01766 116 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 TFP02787 698 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 COX4I1P13073 169 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 MAKP20794 623 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 DRD4P21917 467 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 SLC9A3P48764 834 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 PCBD1P61457 104 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 LIPNQ5VXI9 398 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 VTCN1Q7Z7D3 282 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 OR51A7Q8NH64 312 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 ACOT11Q8WXI4 607 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-220ENST00000519767 YIPF5Q969M3 257 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 TIMM10BQ9Y5J6 103 aa21.65■■□□□ 1.06
VEGFA-220ENST00000519767 SVEP1Q4LDE5 3571 aa21.64■■□□□ 1.06
VEGFA-220ENST00000519767 EFCAB9A8MZ26 197 aa21.64■■□□□ 1.05
VEGFA-220ENST00000519767 NCR1O76036 304 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms