RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ATP5SQ99766 215 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 RACGAP1Q9H0H5 632 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 INPP5EQ9NRR6 644 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 ING4Q9UNL4 249 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 GOLT1BQ9Y3E0 138 aa2.71□□□□□ -1.98
SQLE-202ENST00000518604 AKNAQ7Z591 1439 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 IGHV3-74A0A0B4J1X5 117 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 FAM47DPA6NHR8 397 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 PPP1R2P9O14990 202 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 BET1O15155 118 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 CCNB1P14635 433 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 FOLR1P15328 257 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 ZNF24P17028 368 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 PBLDP30039 288 aaPredicted RBP2.7□□□□□ -1.98
SQLE-202ENST00000518604 HNRNPH3P31942 346 aaKnown RBP2.7□□□□□ -1.98
SQLE-202ENST00000518604 NAA10P41227 235 aaPredicted RBP2.7□□□□□ -1.98
SQLE-202ENST00000518604 NSG1P42857 185 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 NAMPTP43490 491 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 CDKN1BP46527 198 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 ACLYP53396 1101 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 LINC00315P59091 139 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 NUTF2P61970 127 aaKnown RBP2.7□□□□□ -1.98
SQLE-202ENST00000518604 EIF4EBP1Q13541 118 aaPredicted RBP2.7□□□□□ -1.98
SQLE-202ENST00000518604 GINS1Q14691 196 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 XKR7Q5GH72 579 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 THEM4Q5T1C6 240 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 ZNF836Q6ZNA1 936 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 C15orf56Q8N910 161 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 FBXL13Q8NEE6 735 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 SEH1LQ96EE3 360 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 ZNF578Q96N58 590 aaPredicted RBP2.7□□□□□ -1.98
SQLE-202ENST00000518604 OR2A5Q96R48 311 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 CENPKQ9BS16 269 aa2.7□□□□□ -1.98
SQLE-202ENST00000518604 MROH7-TTC4A0A0A0MT08 1334 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CIB4A0PJX0 185 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 GOLGA8OA6NCC3 632 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 GOLGA8NF8WBI6 632 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 AIFM1O95831 613 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 GNAO1P09471 354 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 TLX1NBP0CAT3 122 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 ZNF823P16415 610 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 AQP2P41181 271 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CDKN2BP42772 138 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 ARG2P78540 354 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 ERCC8Q13216 396 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 SLAQ13239 276 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 IDI1Q13907 227 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 FAM83EQ2M2I3 478 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 RAET1LQ5VY80 246 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 ANKRD26P1Q6NSI1 321 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 DUX4L9Q6RFH8 374 aaPredicted RBP2.69□□□□□ -1.98
SQLE-202ENST00000518604 SASS6Q6UVJ0 657 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 NIPA1Q7RTP0 329 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 ASCL5Q7RTU5 278 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CDH26Q8IXH8 852 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CYB561D1Q8N8Q1 229 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 OR2L8Q8NGY9 312 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 UBALD1Q8TB05 177 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 RAB3IL1Q8TBN0 382 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 PKNOX2Q96KN3 472 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 SERPINB12Q96P63 405 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CCDC77Q9BR77 488 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 LZTS2Q9BRK4 669 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 NDFIP1Q9BT67 221 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CHAC1Q9BUX1 264 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 NECAP2Q9NVZ3 263 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CTNNA3Q9UI47 895 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 CNTNAP1P78357 1384 aa2.69□□□□□ -1.98
SQLE-202ENST00000518604 SMCO3A2RU48 225 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 LRRIQ3A6PVS8 624 aaPredicted RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 F6UB75 175 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 SRP72O76094 671 aaKnown RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 SLC25A14O95258 325 aaPredicted RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 CLIC3O95833 236 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 FABP3P05413 133 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 CISD3P0C7P0 127 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 PRPS2P11908 318 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 PSMC3P17980 439 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 PGAM1P18669 254 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 RAB3BP20337 219 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 TMED10P49755 219 aaKnown RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 ACTA2P62736 377 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 ACTG2P63267 376 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 ACTC1P68032 377 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 ARMC12Q5T9G4 340 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 ZYG11AQ6WRX3 759 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 Q6ZSR3 168 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 PGAM4Q8N0Y7 254 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 OR4C5Q8NGB2 326 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 OR10G2Q8NGC3 310 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 ACMSDQ8TDX5 336 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 CNDP1Q96KN2 507 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 NUP58Q9BVL2 599 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 FGF20Q9NP95 211 aaPredicted RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 SAMSN1Q9NSI8 373 aaKnown RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 FAM49BQ9NUQ9 324 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 UXTQ9UBK9 157 aaPredicted RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 LSM7Q9UK45 103 aaKnown RBP2.68□□□□□ -1.98
SQLE-202ENST00000518604 PSG8Q9UQ74 426 aa2.68□□□□□ -1.98
SQLE-202ENST00000518604 MRPS18BQ9Y676 258 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms