RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TRGV5A0A0B4J1U4 118 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NPIPA5A0A0B4J1W7 369 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TRGV8A0A0C4DH27 118 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 A0A1B0GTH9 108 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TMEM89A2RUT3 159 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ASPDHA6ND91 283 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 C5orf58C9J3I9 102 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NPIPA7E9PJI5 369 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 H3BNH8 94 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CLIC1O00299 241 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 RNF13O43567 381 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SPRY2O43597 315 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FCMRO60667 390 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NDUFS6O75380 124 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 TRIM3O75382 744 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 STX11O75558 287 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ANGPTL1O95841 491 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NUDT14O95848 222 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 C1QCP02747 245 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MT-ND1P03886 318 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FESP07332 822 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 IGFBP1P08833 259 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 IFI6P09912 130 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NPIPA8P0DM63 369 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SPP1P10451 314 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FCGR2AP12318 317 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ETFAP13804 333 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ABOP16442 354 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 HOXB9P17482 250 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 MPZP25189 248 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 EVI2BP34910 448 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GCKP35557 465 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZFP36L2P47974 494 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 UQCRFS1P47985 274 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MRPL19P49406 292 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 BCAP31P51572 246 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SIRPAP78324 504 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FOXL1Q12952 345 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SLAQ13239 276 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 RCAN2Q14206 197 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PDK3Q15120 406 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MAPRE2Q15555 327 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SYPL1Q16563 259 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZSCAN26Q16670 478 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PCK2Q16822 640 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF829Q3KNS6 432 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 GTDC1Q4AE62 458 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SMUG1Q53HV7 270 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CMPK2Q5EBM0 449 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 BEX5Q5H9J7 111 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF311Q5JNZ3 666 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PAGE3Q5JUK9 113 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PDZK1Q5T2W1 519 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF324BQ6AW86 544 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 TIGD3Q6B0B8 471 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ASPHD2Q6ICH7 369 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF585AQ6P3V2 769 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 B3GLCTQ6Y288 498 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SIGLEC15Q6ZMC9 328 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 C3P1Q6ZMU1 363 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OLIG3Q7RTU3 272 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 HMGN2P46Q86SG4 172 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 DHDDSQ86SQ9 333 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FAM109AQ8N4B1 249 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TMEM251Q8N6I4 163 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZFP62Q8NB50 900 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 ST6GALNAC3Q8NDV1 305 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR4K17Q8NGC6 315 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 OR5M9Q8NGP3 310 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF596Q8TC21 504 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 FAM110BQ8TC76 370 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZFP90Q8TF47 636 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 C10orf82Q8WW14 230 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NR4A3Q92570 626 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ROPN1LQ96C74 230 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SH3YL1Q96HL8 342 aaPredicted RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF479Q96JC4 524 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GPR137Q96N19 417 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CCT8L2Q96SF2 557 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SDF2Q99470 211 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MRPL13Q9BYD1 178 aaKnown RBP2.46□□□□□ -2.02
SKP1-204ENST00000517691 NMUR2Q9GZQ4 415 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 HOXD1Q9GZZ0 328 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 DSN1Q9H410 356 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ZNF385DQ9H6B1 395 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PTGES2Q9H7Z7 377 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TPT1P8Q9HAU6 139 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 PROK2Q9HC23 129 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 NEK6Q9HC98 313 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MSL2Q9HCI7 577 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 HHATLQ9HCP6 504 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SH2D2AQ9NP31 389 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SAR1AQ9NR31 198 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 UBQLN4Q9NRR5 601 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 TMEM45AQ9NWC5 275 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 GID8Q9NWU2 228 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 KLHL28Q9NXS3 571 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 MED11Q9P086 117 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 DKKL1Q9UK85 242 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 ADAM21Q9UKJ8 722 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms