RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 ISYNA1Q9NPH2 558 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 TIGARQ9NQ88 270 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 IFT46Q9NQC8 304 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 PLCXD1Q9NUJ7 323 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 NLE1Q9NVX2 485 aaPredicted RBP2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 MAT2BQ9NZL9 334 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 EMC3Q9P0I2 261 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 ASIC3Q9UHC3 531 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 CYB5R1Q9UHQ9 305 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 PLLPQ9Y342 182 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 GOLT1BQ9Y3E0 138 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 HYOU1Q9Y4L1 999 aa2.16□□□□□ -2.06
SCARNA11.3-201ENST00000517276 AQRO60306 1485 aaKnown RBP eCLIP2.15□□□□□ -2.06
SCARNA11.3-201ENST00000517276 MEIOCA2RUB1 952 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 A6NIZ1 184 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PMS2P5A8MQ11 134 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FAM166BA8MTA8 275 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FOXI3A8MTJ6 420 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 B4DXG7 233 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ERVV-1B6SEH8 477 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ERVV-2B6SEH9 535 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 K7ENP7 123 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SULT1C2O00338 296 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GABRPO00591 440 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 NME4O00746 187 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 LIN7AO14910 233 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FGF17O60258 216 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 DPM1O60762 260 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 FKBP6O75344 327 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 BMP15O95972 392 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 KLK3P07288 261 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 HOXC4P09017 264 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OCMP0CE72 109 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PSKH1P11801 424 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TCP1P17987 556 aaKnown RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CXCR2P25025 360 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 HLA-DMAP28067 261 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 HOXA9P31269 272 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CDKN2AP42771 156 aaKnown RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 MAGEA3P43357 314 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 HNRNPA3P51991 378 aaKnown RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 EFNA3P52797 238 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SUB1P53999 127 aaKnown RBP eCLIP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RAP1BP61224 184 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RPL31P62899 125 aaKnown RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TLE4Q04727 773 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CHRNB3Q05901 458 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 BCL2L1Q07817 233 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SLC10A7Q0GE19 358 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 DYNC1I2Q13409 638 aaKnown RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CYLC2Q14093 348 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ZNF726P1Q15940 193 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 QRICH1Q2TAL8 776 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PGGHGQ32M88 737 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 KRTAP19-4Q3LI73 84 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PARP15Q460N3 678 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ACTL10Q5JWF8 245 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ADAMTSL4-AS1Q5T5F5 129 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 C11orf87Q6NUJ2 197 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CD300LGQ6UXG3 332 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TFAP2EQ6VUC0 442 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SMIM29Q86T20 159 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 PLA2G4DQ86XP0 818 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TMEM25Q86YD3 366 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CBLN2Q8IUK8 224 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 C9orf40Q8IXQ3 194 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 VN1R2Q8NFZ6 395 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR5AR1Q8NGP9 310 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR2L2Q8NH16 312 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 OR51A7Q8NH64 312 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 RNASEH2CQ8TDP1 164 aaKnown RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CHCHD10Q8WYQ3 142 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ARPC1AQ92747 370 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 TAF15Q92804 592 aaKnown RBP eCLIP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 GMPPAQ96IJ6 420 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SCGB3A2Q96PL1 93 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 MEIS3Q99687 375 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ATF6BQ99941 703 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 COPS4Q9BT78 406 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 WDR54Q9H977 334 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SIAEQ9HAT2 523 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 KCNJ16Q9NPI9 418 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 KCNIP1Q9NZI2 227 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ZNF282Q9UDV7 671 aaPredicted RBP2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 Q9UF83 564 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 SPATA2Q9UM82 520 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 AUP1Q9Y679 476 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 CACNA1IQ9P0X4 2223 aa2.15□□□□□ -2.07
SCARNA11.3-201ENST00000517276 POLR3AO14802 1390 aaPredicted RBP2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 MSH6P52701 1360 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 ANKRD30BQ9BXX2 1392 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 IGHV1OR21-1A0A087WYE8 117 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 A0A0A6YYD5 115 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 A0A0G2JLM5 398 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 A0A1B0GU03 582 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 A0A1B0GVI7 797 aa2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 BCLAF3A2AJT9 711 aaKnown RBP2.14□□□□□ -2.07
SCARNA11.3-201ENST00000517276 NCBP2LA6PVI3 153 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms