RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 M0R296 226 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 ST8SIA3O43173 380 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PPIHO43447 177 aaKnown RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 CDC40O60508 579 aaKnown RBP eCLIP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 TRIM3O75382 744 aaPredicted RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 SCGB1D2O95969 90 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PAHP00439 452 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 RPN2P04844 631 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 GSTA1P08263 222 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 TPBGLP0DKB5 382 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 ZNF3P17036 446 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 XBP1P17861 261 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PSMB9P28065 219 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 MAGEA1P43355 309 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 HINT1P49773 126 aaPredicted RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR12D2P58182 307 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 FXYD6P3P58550 94 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 FKBP1BP68106 108 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 RELAQ04206 551 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLC3A1Q07837 685 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 TSPAN31Q12999 210 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 ILKQ13418 452 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 FILIP1LQ4L180 1135 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 CCDC38Q502W7 563 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 ERMARDQ5T6L9 678 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR8G2PQ6IF36 304 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 TMEM154Q6P9G4 183 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 ARL9Q6T311 187 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 CD300LGQ6UXG3 332 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 HS3ST5Q8IZT8 346 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 GUF1Q8N442 669 aaKnown RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 NCOA7Q8NI08 942 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PIFOQ8TCI5 191 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PTPMT1Q8WUK0 201 aaPredicted RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 TMBIM1Q969X1 311 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 TMEM186Q96B77 213 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 CMTM3Q96MX0 182 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PAFAH2Q99487 392 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 Q9BRP9 147 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 SMARCAD1Q9H4L7 1026 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR2S2Q9NQN1 319 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 OLAHQ9NV23 265 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 NDUFB11Q9NX14 153 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 RHBDL2Q9NX52 303 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PSD3Q9NYI0 1048 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 SEC63Q9UGP8 760 aaKnown RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 MRTO4Q9UKD2 239 aaKnown RBP-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 PPIL1Q9Y3C6 166 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 COL12A1Q99715 3063 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 SLX4Q8IY92 1834 aa-2.33□□□□□ -2.78
SNORA40.16-201ENST00000517238 MED13LQ71F56 2210 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 LOXHD1Q8IVV2 1947 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 KIF7Q2M1P5 1343 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 GPR75-ASB3A0A0A6YYF3 556 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 A0A0B4J2C4 111 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 A0A1W2PQ09 198 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 GMNCA6NCL1 334 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 FAM47DPA6NHR8 397 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 CDRT15L2A8MXV6 281 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 C12orf77C9JDV5 145 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 CHUKO15111 745 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 RNF113AO15541 343 aaKnown RBP-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR2T1O43869 369 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PLIN1O60240 522 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 KRT75O95678 551 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 MT-CO2P00403 227 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 RPA2P15927 270 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PPARGP37231 505 aaPredicted RBP-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 HCAR3P49019 387 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 RGS7P49802 495 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 CRYBB1P53674 252 aaPredicted RBP-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 AK2P54819 239 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 CDH8P55286 799 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 CCNA1P78396 465 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 GABPAQ06546 454 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 DGCR6Q14129 220 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PON3Q15166 354 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 ZMYND11Q15326 602 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 TAL2Q16559 108 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 ORMDL2Q53FV1 153 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 TRMT12Q53H54 448 aaKnown RBP-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PNCKQ6P2M8 343 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PODNL1Q6PEZ8 512 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 GLIPR1L1Q6UWM5 242 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 Q6ZN92 141 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 LRRC74BQ6ZQY2 392 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 DHDDSQ86SQ9 333 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 ZNF546Q86UE3 836 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 AMZ2Q86W34 360 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 HOMEZQ8IX15 550 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 RPRMLQ8N4K4 120 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 TTC30BQ8N4P2 665 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PDILTQ8N807 584 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 ATP6V0D2Q8N8Y2 350 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 BPIFB6Q8NFQ5 453 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 OR4S2Q8NH73 311 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 DDIT4LQ96D03 193 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 VPS35Q96QK1 796 aa-2.34□□□□□ -2.78
SNORA40.16-201ENST00000517238 PARK7Q99497 189 aaKnown RBP-2.34□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms