RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 A0A1B0GTH9 108 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1B0GUS0 222 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1B0GVI7 797 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1B0GWB2 263 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1W2PR80 420 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRSS37A4D1T9 235 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LINC01553A4QN01 128 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 VPS37CA5D8V6 355 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 A6NDN8 102 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLGA6L4A6NEF3 574 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGLON5A6NGN9 336 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MSGN1A6NI15 193 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 USP27XA6NNY8 438 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EFCAB7A8K855 629 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LYRM9A8MSI8 78 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF724A8MTY0 619 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HIDE1A8MVS5 230 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HACD1B0YJ81 288 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 B4DXG7 233 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRDCB7Z8K6 153 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C9J4A7 227 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 INAFM1C9JVW0 142 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF587BE7ETH6 402 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANHXE9PGG2 379 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 E9PLD3 99 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LOC110117498-PIK3R3F6TDL0 507 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SMKR1H3BMG3 65 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 H3BNH8 94 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GFYI3L273 518 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 K7ERI5 159 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 M0QXV9 152 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 M0QZ92 97 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCNK1O00180 336 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SULT2B1O00204 365 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PGRMC1O00264 195 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDC7O00311 574 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLPP1O14494 284 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PHYHO14832 338 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HAT1O14929 419 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPP1R2P9O14990 202 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACOX3O15254 700 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SURF4O15260 269 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SIGLEC5O15389 551 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RGS16O15492 202 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 B4GALT5O43286 388 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ERI3O43414 337 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RGS14O43566 566 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYNGR1O43759 233 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EFNA2O43921 213 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRKYO43930 277 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRKNO60260 465 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MGRN1O60291 552 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC16A7O60669 478 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 UGT2B11O75310 529 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUSP11O75319 330 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MPDU1O75352 247 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FRAT2O75474 233 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSIP1O75475 530 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLDN11O75508 207 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EEDO75530 441 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EIF3GO75821 320 aaKnown RBP eCLIP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SC5DO75845 299 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CIAO1O76071 339 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GLSO94925 669 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RCBTB2O95199 551 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 UTS2O95399 124 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSMG1O95456 288 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SEC24AO95486 1093 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 NADKO95544 446 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C1orf105O95561 183 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB3DO95716 219 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SNAP29O95721 258 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PMS2P2O95744 297 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB36O95755 333 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLIC3O95833 236 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACTL6AO96019 429 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HPRT1P00492 218 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SERPINA1P01009 418 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGGP02679 453 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ORM1P02763 201 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SERPINA5P05154 406 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDK1P06493 297 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 KLK3P07288 261 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GP1BAP07359 652 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FCGR3AP08637 254 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD3GP09693 182 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5AL1P0C617 328 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FRMD6-AS1P0C7T7 363 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LINC00271P0C7V0 271 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C8orf88P0DMB2 117 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CT45A6P0DMU7 189 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CT45A5P0DMU8 189 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CT45A7P0DMV0 189 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV4-38-2P0DP08 117 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CALM1P0DP23 149 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CALM2P0DP24 149 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CALM3P0DP25 149 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 COX5BP10606 129 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSPD1P10809 573 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms