RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 LINC00336Q6ZUF6 198 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 PIGWQ7Z7B1 504 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 ISCA2Q86U28 154 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 SKA3Q8IX90 412 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 CMTM4Q8IZR5 234 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 C1orf87Q8N0U7 546 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 TMEM123Q8N131 208 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 KDM8Q8N371 416 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 FBLIM1Q8WUP2 373 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 CFAP36Q96G28 342 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 ZNF347Q96SE7 839 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 RHOJQ9H4E5 214 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 EIF3KQ9UBQ5 218 aaKnown RBP6.08□□□□□ -1.44
CLDND1-229ENST00000513988 SNX6Q9UNH7 406 aa6.08□□□□□ -1.44
CLDND1-229ENST00000513988 ELOVL7A1L3X0 281 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 PRAMEF27A3QJZ7 478 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 NUDT19A8MXV4 375 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 SEC14L6B5MCN3 397 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 RNASET2O00584 256 aaKnown RBP6.07□□□□□ -1.44
CLDND1-229ENST00000513988 PPP6CO00743 305 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 GLRA3O75311 464 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 ENTPD5O75356 428 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 STMN1P16949 149 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 ADMP35318 185 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 APLNRP35414 380 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 HTR5AP47898 357 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 RGS6P49758 472 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 ALDH18A1P54886 795 aaKnown RBP6.07□□□□□ -1.44
CLDND1-229ENST00000513988 PLP2Q04941 152 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 LASP1Q14847 261 aaKnown RBP6.07□□□□□ -1.44
CLDND1-229ENST00000513988 SPA17Q15506 151 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 SPIN4Q56A73 249 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 XKR7Q5GH72 579 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 EXOSC6Q5RKV6 272 aaKnown RBP6.07□□□□□ -1.44
CLDND1-229ENST00000513988 RNF165Q6ZSG1 346 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 BTN2A1Q7KYR7 527 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 ZNF572Q7Z3I7 529 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-229ENST00000513988 CLHC1Q8NHS4 586 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 ZFP28Q8NHY6 868 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 C17orf50Q8WW18 174 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 UBXN10Q96LJ8 280 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 P2RX4Q99571 388 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 ULBP2Q9BZM5 246 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 NMRAL1Q9HBL8 299 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 CTSZQ9UBR2 303 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 SCOCQ9UIL1 159 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
CLDND1-229ENST00000513988 FAT2Q9NYQ8 4349 aa6.07□□□□□ -1.44
CLDND1-229ENST00000513988 H3BSA7 217 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 PDPK1O15530 556 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 ECDO95905 644 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-229ENST00000513988 HMGN2P05204 90 aaKnown RBP6.06□□□□□ -1.44
CLDND1-229ENST00000513988 TPM1P09493 284 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 MAPK1P28482 360 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 ACAA2P42765 397 aaKnown RBP6.06□□□□□ -1.44
CLDND1-229ENST00000513988 MTNR1BP49286 362 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 UBE2E1P51965 193 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 DLX1P56177 255 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 PPP1CBP62140 327 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 GPR68Q15743 365 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 ZNF141Q15928 474 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 GGTA1PQ4G0N0 100 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 FAM71E1Q6IPT2 247 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 TMEM219Q86XT9 240 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 IGDCC3Q8IVU1 814 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 LRRC8AQ8IWT6 810 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 C20orf196Q8IYI0 205 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 HIPK4Q8NE63 616 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 FAM71CQ8NEG0 241 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 VPS37AQ8NEZ2 397 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 OR4F6Q8NGB9 312 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 OR52H1Q8NGJ2 320 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 OR5M8Q8NGP6 311 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 BPIFA3Q9BQP9 254 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 MECRQ9BV79 373 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 SMURF1Q9HCE7 757 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 MAN2C1Q9NTJ4 1040 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 TBCCD1Q9NVR7 557 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 SELENONQ9NZV5 590 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 SLC35A3Q9Y2D2 325 aa6.06□□□□□ -1.44
CLDND1-229ENST00000513988 MTO1Q9Y2Z2 717 aaKnown RBP6.06□□□□□ -1.44
CLDND1-229ENST00000513988 ADAM20O43506 726 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 FCMRO60667 390 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 BCAS1O75363 584 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-229ENST00000513988 CRCPO75575 148 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 KRT14P02533 472 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 HSD3B1P14060 373 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 IRF2P14316 349 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 CHN1P15882 459 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 CXCR1P25024 350 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 PAX6P26367 422 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 HSD3B2P26439 372 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 PGM1P36871 562 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 PMELP40967 661 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 WNT5AP41221 380 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 BLCAPP62952 87 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 MGAT5Q09328 741 aa6.05□□□□□ -1.44
CLDND1-229ENST00000513988 ILF2Q12905 390 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms