RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TRBV5-5A0A0J9YX44 114 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 TMEM212A6NML5 194 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PRR33A8MZF0 331 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PIN1P1O15428 100 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PFDN1O60925 122 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PGA4P0DJD7 388 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PGA3P0DJD8 388 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 CYB561P49447 251 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 DEFA1P59665 94 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 DEFA3P59666 94 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 H3F3AP84243 136 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RASGEF1BQ0VAM2 473 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 CDC20Q12834 499 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 EIF2B1Q14232 305 aaKnown RBP13.34□□□□□ -0.27
VCAN-211ENST00000513984 CEP78Q5JTW2 689 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 THEM4Q5T1C6 240 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 OTPQ5XKR4 325 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 TMEM225Q6GV28 225 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 LRRN1Q6UXK5 716 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 NOXO1Q8NFA2 376 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 OR6X1Q8NH79 312 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RNF128Q8TEB7 428 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 SLC25A44Q96H78 314 aaPredicted RBP13.34□□□□□ -0.27
VCAN-211ENST00000513984 C4orf45Q96LM5 186 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 DERL3Q96Q80 235 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RBP7Q96R05 134 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 ABHD6Q9BV23 337 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 ELOVL3Q9HB03 270 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 NOX4Q9NPH5 578 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RASD1Q9Y272 281 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 A0A1W2PPK0 400 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 ANKRD61A6NGH8 418 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 LRRC3CA6NJW4 275 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RAMP1O60894 148 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 AQP8O94778 261 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 ZNF432O94892 652 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 MPZL1O95297 269 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 IGHG1P01857 330 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 ZNF823P16415 610 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 AZGP1P25311 298 aaKnown RBP13.34□□□□□ -0.27
VCAN-211ENST00000513984 CCR9P51686 369 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RAC1P63000 192 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 RIN1Q13671 783 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 SLC25A35Q3KQZ1 300 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 Q499Y3 187 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.34□□□□□ -0.27
VCAN-211ENST00000513984 GPAT4Q86UL3 456 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 OR8H2Q8N162 312 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 OR52N5Q8NH56 324 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 SETD6Q8TBK2 473 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
VCAN-211ENST00000513984 PTPRBP23467 1997 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 A0A087WV48 116 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 A0A1B0GTH9 108 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 FUOMA2VDF0 154 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 ACOD1A6NK06 481 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 EIF1BO60739 113 aaKnown RBP13.33□□□□□ -0.28
VCAN-211ENST00000513984 TMCC2O75069 709 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 ZNF254O75437 659 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 IL7P13232 177 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 ZNF43P17038 809 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 SRMP19623 302 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 MAPK3P27361 379 aaPredicted RBP13.33□□□□□ -0.28
VCAN-211ENST00000513984 KIR3DL2P43630 455 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 B3GALT5-AS1P59052 145 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 BAK1Q16611 211 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 DCAF10Q5QP82 559 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 GLB1L2Q8IW92 636 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 IP6K3Q96PC2 410 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 COMMD4Q9H0A8 199 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 PPP1R3EQ9H7J1 279 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 TEKT2Q9UIF3 430 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 TBC1D24Q9ULP9 559 aa13.33□□□□□ -0.28
VCAN-211ENST00000513984 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 EPXP11678 715 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 KLK2P20151 261 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 APEX1P27695 318 aaKnown RBP13.32□□□□□ -0.28
VCAN-211ENST00000513984 BCAP31P51572 246 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 RIDAP52758 137 aaKnown RBP13.32□□□□□ -0.28
VCAN-211ENST00000513984 CLRN1P58418 232 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 CSNK2A1P68400 391 aaPredicted RBP13.32□□□□□ -0.28
VCAN-211ENST00000513984 WDR38Q5JTN6 314 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 KRT77Q7Z794 578 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 LRRC28Q86X40 367 aaPredicted RBP13.32□□□□□ -0.28
VCAN-211ENST00000513984 DEFB124Q8NES8 71 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 ST7LQ8TDW4 575 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 PPP1R14BQ96C90 147 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.32□□□□□ -0.28
VCAN-211ENST00000513984 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 TIGARQ9NQ88 270 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 DEPPQ9NTK1 212 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 STMN3Q9NZ72 180 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 IL17BQ9UHF5 180 aa13.32□□□□□ -0.28
VCAN-211ENST00000513984 MRPS18CQ9Y3D5 142 aaKnown RBP13.32□□□□□ -0.28
VCAN-211ENST00000513984 LRP12Q9Y561 859 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms