RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582		A0A1B0GVT2	93 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	TMEM189-UBE2V1	I3L0A0	370 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	RAB3D	O95716	219 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	TXNDC12	O95881	172 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	SLC25A4	P12235	298 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	F3	P13726	295 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	SNRPN	P63162	240 aa	Known RBP	10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	TGM3	Q08188	693 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	VWA2	Q5GFL6	755 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	TMEM244	Q5VVB8	128 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	DND1	Q8IYX4	353 aa	Known RBP	10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	CBARP	Q8N350	705 aa	Predicted RBP	10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	OR51D1	Q8NGF3	324 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	LMLN	Q96KR4	655 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	CMTM3	Q96MX0	182 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	LPAR3	Q9UBY5	353 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	CACFD1	Q9UGQ2	172 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	SNRPC	P09234	159 aa	Known RBP	10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	PCBP4	P57723	403 aa	Known RBP	10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	BTN3A2	P78410	334 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	TMPPE	Q6ZT21	453 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	GALNT16	Q8N428	558 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	FRMD1	Q8N878	549 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	KIRREL1	Q96J84	757 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582	RGCC	Q9H4X1	137 aa		10.14	□□□□□ -0.79
PDCD6-210	ENST00000513582		A0A1W2PS29	197 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	DCTN6	O00399	190 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	OGG1	O15527	345 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	KLF4	O43474	513 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	TMPRSS11D	O60235	418 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	PRKN	O60260	465 aa	Predicted RBP	10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	MOSPD3	O75425	235 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	SLCO2B1	O94956	709 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	FAM157C	P0CG43	387 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	LPAR6	P43657	344 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	FAM46C	Q5VWP2	391 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	NXPE4	Q6UWF7	544 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	CD163	Q86VB7	1156 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	GAL3ST3	Q96A11	431 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	TIFA	Q96CG3	184 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	CMC2	Q9NRP2	79 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	USP36	Q9P275	1121 aa	Known RBP	10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	UPB1	Q9UBR1	384 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ZDHHC8	Q9ULC8	765 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	FAM171A2	A8MVW0	826 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ALOX12B	O75342	701 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ZFPL1	O95159	310 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	RPL4	P36578	427 aa	Known RBP	10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	SKP1	P63208	163 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	DEFB134	Q4QY38	66 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	OR2A2	Q6IF42	318 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	STAC2	Q6ZMT1	411 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	GABRG1	Q8N1C3	465 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	OR4K13	Q8NH42	304 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	MOAP1	Q96BY2	351 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ACTRT3	Q9BYD9	372 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ATG5	Q9H1Y0	275 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	LHX9	Q9NQ69	397 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	TMEM100	Q9NV29	134 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	TAS2R8	Q9NYW2	309 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	IGLV3-16	A0A075B6K0	115 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582		A0A1W2PP55	124 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	TSTD3	H0UI37	97 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	XRCC3	O43542	346 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	FBXO24	O75426	580 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	RDH16	O75452	317 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ZNF28	P17035	718 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ADRA2C	P18825	462 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	RAB6A	P20340	208 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	PRSS3	P35030	304 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ACTC1	P68032	377 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ACTA1	P68133	377 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	ALKBH2	Q6NS38	261 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	RPL22L1	Q6P5R6	122 aa	Known RBP	10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	OR6K6	Q8NGW6	343 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	NEU1	Q99519	415 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	CHST5	Q9GZS9	411 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	AHCTF1	Q8WYP5	2266 aa		10.13	□□□□□ -0.79
PDCD6-210	ENST00000513582	CLDN4	O14493	209 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	LRP3	O75074	770 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	IFNA17	P01571	189 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	ITGB2	P05107	769 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	HIST1H1B	P16401	226 aa	Known RBP	10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	NANOS3	P60323	173 aa	Known RBP	10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	OR8G1	Q15617	311 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	NSUN5P2	Q63ZY6	315 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	FAM111B	Q6SJ93	734 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	VIT	Q6UXI7	678 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	GJD3	Q8N144	294 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	SLC39A11	Q8N1S5	342 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	METTL27	Q8N6F8	245 aa	Predicted RBP	10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	GATS	Q8NAP1	163 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	OR52E2	Q8NGJ4	325 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	CD300LF	Q8TDQ1	290 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	AMDHD1	Q96NU7	426 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	RAB33B	Q9H082	229 aa		10.12	□□□□□ -0.79
PDCD6-210	ENST00000513582	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms