RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 HTR2AP28223 471 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 RBM34P42696 430 aaKnown RBP8.69□□□□□ -1.02
CCL28-203ENST00000513525 PTH2RP49190 550 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 CLK1P49759 484 aaKnown RBP8.69□□□□□ -1.02
CCL28-203ENST00000513525 NUDT6P53370 316 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 OR1Q1Q15612 314 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 TAB1Q15750 504 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 CTF1Q16619 201 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 NCMAPQ5T1S8 102 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 SEZ6L2Q6UXD5 910 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 LINC00299Q6ZSB3 139 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 SSX8Q7RTT4 187 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 GRINAQ7Z429 371 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 NKAIN4Q8IVV8 208 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 ZNF440Q8IYI8 595 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 ZNF563Q8TA94 476 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 TMEM171Q8WVE6 324 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 HSD17B8Q92506 261 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 KISS1RQ969F8 398 aaPredicted RBP8.69□□□□□ -1.02
CCL28-203ENST00000513525 PERPQ96FX8 193 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 COX4I2Q96KJ9 171 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 IL4I1Q96RQ9 567 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 DCUN1D5Q9BTE7 237 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 POTEKPQ9BYX7 375 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 TRIM2Q9C040 744 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 ZNF701Q9NV72 531 aaPredicted RBP8.69□□□□□ -1.02
CCL28-203ENST00000513525 IL20Q9NYY1 176 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 TVP23BQ9NYZ1 205 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 SLC7A7Q9UM01 511 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 HDGFL3Q9Y3E1 203 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 CDH10Q9Y6N8 788 aa8.69□□□□□ -1.02
CCL28-203ENST00000513525 CHD3Q12873 2000 aaKnown RBP8.69□□□□□ -1.02
CCL28-203ENST00000513525 FN1P02751 2386 aaKnown RBP8.68□□□□□ -1.02
CCL28-203ENST00000513525 ZNF716A6NP11 495 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 M0R129 80 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 ADAM11O75078 769 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 HMGN1P05114 100 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 LCKP06239 509 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 C21orf33P30042 268 aaPredicted RBP8.68□□□□□ -1.02
CCL28-203ENST00000513525 TGFBR2P37173 567 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 HTR3AP46098 478 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 HOXC5Q00444 222 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 ZNF91Q05481 1191 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 PRKCDQ05655 676 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TIGD6Q17RP2 521 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 ACSM5Q6NUN0 579 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 RPL13AP3Q6NVV1 102 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 ZNF620Q6ZNG0 422 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 BHLHA15Q7RTS1 189 aaPredicted RBP8.68□□□□□ -1.02
CCL28-203ENST00000513525 ADGRG3Q86Y34 549 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 NRMQ8IXM6 262 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TCEANCQ8N8B7 351 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TMEM163Q8TC26 289 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TMEM255BQ8WV15 326 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TMEM239Q8WW34 195 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TMEM80Q96HE8 168 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
CCL28-203ENST00000513525 ARL5BQ96KC2 179 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 Q96MF0 132 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 SMR3AQ99954 134 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 PRSS27Q9BQR3 290 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 ESRP2Q9H6T0 727 aaKnown RBP8.68□□□□□ -1.02
CCL28-203ENST00000513525 AMBNQ9NP70 447 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 MRPS18AQ9NVS2 196 aaKnown RBP8.68□□□□□ -1.02
CCL28-203ENST00000513525 EMC3Q9P0I2 261 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 PRSS50Q9UI38 385 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 TRAPPC4Q9Y296 219 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 RNF115Q9Y4L5 304 aa8.68□□□□□ -1.02
CCL28-203ENST00000513525 A0A0B4J2E0 115 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 A0A1B0GX12 115 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 HTR3EA5X5Y0 456 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 UNC119BA6NIH7 251 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 PRODHO43272 600 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 CHP2O43745 196 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 PRKYO43930 277 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 HEXAP06865 529 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 GKN3PP0CG01 181 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 ADORA3P0DMS8 318 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 DBTP11182 482 aaKnown RBP8.67□□□□□ -1.02
CCL28-203ENST00000513525 PRG2P13727 222 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 CD36P16671 472 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 EDNRAP25101 427 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 MAP2K6P52564 334 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 SLC16A1P53985 500 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 LTBQ06643 244 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.67□□□□□ -1.02
CCL28-203ENST00000513525 AQP6Q13520 282 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 DCTN2Q13561 401 aaKnown RBP8.67□□□□□ -1.02
CCL28-203ENST00000513525 TSC22D1Q15714 1073 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 SNAPC1Q16533 368 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 KLHL22Q53GT1 634 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 CSPG4Q6UVK1 2322 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 CLEC9AQ6UXN8 241 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 TMPRSS11FQ6ZWK6 438 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 SLC46A3Q7Z3Q1 461 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 CDK20Q8IZL9 346 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 IQCF1Q8N6M8 205 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 LSMEM1Q8N8F7 131 aa8.67□□□□□ -1.02
CCL28-203ENST00000513525 LILRB1Q8NHL6 650 aaPredicted RBP8.67□□□□□ -1.02
CCL28-203ENST00000513525 CNOT9Q92600 299 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms