RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RALYQ9UKM9 306 aaKnown RBP11.04□□□□□ -0.64
PDPN-210ENST00000513143 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDPN-210ENST00000513143 LRCH1Q9Y2L9 728 aa11.04□□□□□ -0.64
PDPN-210ENST00000513143 COA3Q9Y2R0 106 aaPredicted RBP11.04□□□□□ -0.64
PDPN-210ENST00000513143 UGT2A1Q9Y4X1 527 aa11.04□□□□□ -0.64
PDPN-210ENST00000513143 FAM171A2A8MVW0 826 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 A8MXE2 369 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 ZNF99A8MXY4 864 aaPredicted RBP11.03□□□□□ -0.64
PDPN-210ENST00000513143 BMP5P22003 454 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 LAP3P28838 519 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 MPGP29372 298 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 FMO3P31513 532 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 ZNF84P51523 738 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 BLVRAP53004 296 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 RPS7P62081 194 aaKnown RBP11.03□□□□□ -0.64
PDPN-210ENST00000513143 CSNK2BP67870 215 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 GLO1Q04760 184 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 GGTLC2Q14390 218 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 CEACAM16Q2WEN9 425 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 LCN1P1Q5VSP4 162 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 MTFR2Q6P444 385 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 BEND4Q6ZU67 534 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 MRGPRGQ86SM5 289 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 GABRG1Q8N1C3 465 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 PLCXD1Q9NUJ7 323 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 RPL36Q9Y3U8 105 aaKnown RBP11.03□□□□□ -0.64
PDPN-210ENST00000513143 ZNF462Q96JM2 2506 aa11.03□□□□□ -0.64
PDPN-210ENST00000513143 RELNP78509 3460 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ITGA5P08648 1049 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 GAAP10253 952 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 DBTP11182 482 aaKnown RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 COX5AP20674 150 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 IGHV1-2P23083 117 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 GSTT1P30711 240 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 CHRNB4P30926 498 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 CDAP32320 146 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 SLC15A1P46059 708 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 MTNR1AP48039 350 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 NUDT6P53370 316 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 HSF2Q03933 536 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ZNF91Q05481 1191 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 KCNMB1Q16558 191 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 B3GLCTQ6Y288 498 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ZNF627Q7L945 461 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ZNF511Q8NB15 262 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 RELL2Q8NC24 303 aaPredicted RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 SLC26A10Q8NG04 563 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 OR6K6Q8NGW6 343 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ASB5Q8WWX0 329 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ZMYND19Q96E35 227 aaPredicted RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 FOXN4Q96NZ1 517 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 FOXB1Q99853 325 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 MARCH7Q9H992 704 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 AMBNQ9NP70 447 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 POLE4Q9NR33 117 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 MRPS18AQ9NVS2 196 aaKnown RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 TMEM38BQ9NVV0 291 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 TAS2R16Q9NYV7 291 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 COQ3Q9NZJ6 369 aa11.02□□□□□ -0.65
PDPN-210ENST00000513143 ERRFI1Q9UJM3 462 aaPredicted RBP11.02□□□□□ -0.65
PDPN-210ENST00000513143 A0A1W2PPL8 197 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 SLC1A7O00341 560 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 XPNPEP2O43895 674 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 MPZL1O95297 269 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 GPANK1O95872 356 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 HLA-DQA2P01906 255 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 TFP02787 698 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 HRGP04196 525 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 SCG5P05408 212 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 CCDC159P0C7I6 412 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 NPR2P20594 1047 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 GUCA1AP43080 201 aaPredicted RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 SH3BGRP55822 239 aaPredicted RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 MRPS34P82930 218 aaKnown RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 P2RY6Q15077 328 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 NRN1LQ496H8 165 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 RBM48Q5RL73 367 aaKnown RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 UGT2A3Q6UWM9 527 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 LYPD4Q6UWN0 246 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 LUZP2Q86TE4 346 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 TIGD4Q8IY51 512 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 NABP1Q96AH0 204 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 RNFT2Q96EX2 444 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 BOD1Q96IK1 185 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 YTHDF1Q9BYJ9 559 aaKnown RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 NELFAQ9H3P2 528 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 SEC61A2Q9H9S3 476 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 SIAEQ9HAT2 523 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 MRPL22Q9NWU5 206 aaKnown RBP11.01□□□□□ -0.65
PDPN-210ENST00000513143 PSORS1C1Q9UIG5 152 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 SLC5A6Q9Y289 635 aa11.01□□□□□ -0.65
PDPN-210ENST00000513143 TVP23AA6NH52 213 aa11□□□□□ -0.65
PDPN-210ENST00000513143 EEF1E1-BLOC1S5C9J1V9 151 aa11□□□□□ -0.65
PDPN-210ENST00000513143 EEF1E1O43324 174 aaKnown RBP11□□□□□ -0.65
PDPN-210ENST00000513143 SBK2P0C263 348 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms