RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 DNALI1O14645 258 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 PHF1O43189 567 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 TYROBPO43914 113 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 KBTBD11O94819 623 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 AKR7A3O95154 331 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 C1orf105O95561 183 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 GUCA1CO95843 209 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 ANXA5P08758 320 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 IGFBP1P08833 259 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 MLNP12872 115 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 UQCRBP14927 111 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 MAGP20916 626 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 PAICSP22234 425 aaKnown RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 CXCR2P25025 360 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 PSMB5P28074 263 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 OR1D4P47884 311 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 HTR5AP47898 357 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CAMLGP49069 296 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 RGS4P49798 205 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 DCDP81605 110 aaKnown RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 C2orf54Q08AI8 447 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 KCNJ11Q14654 390 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 RAB35Q15286 201 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 IGFBP7Q16270 282 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 SLC5A12Q1EHB4 618 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CCSMST1Q4G0I0 132 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 ACSF3Q4G176 576 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 ACSBG2Q5FVE4 666 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 SPANXN3Q5MJ09 141 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 DMKNQ6E0U4 476 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 ARSKQ6UWY0 536 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 UNC5DQ6UXZ4 953 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CENPUQ71F23 418 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 RAB43Q86YS6 212 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CTAGE3PQ8IX95 158 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CPNE9Q8IYJ1 553 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CADM2Q8N3J6 435 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 BBOF1Q8ND07 529 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 OR4F17Q8NGA8 305 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 OR9A1PQ8NGU1 263 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 OR2L8Q8NGY9 312 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 PYROXD1Q8WU10 500 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 EEF1AKMT1Q8WVE0 214 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 DLX4Q92988 240 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 TRIM44Q96DX7 344 aaPredicted RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 SNF8Q96H20 258 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 C9orf85Q96MD7 179 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 SERPINB12Q96P63 405 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 OR4F4Q96R69 305 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 GPR21Q99679 349 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 EBNA1BP2Q99848 306 aaKnown RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 SELENOSQ9BQE4 189 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 DPH7Q9BTV6 452 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 ING2Q9H160 280 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 KAT8Q9H7Z6 458 aaKnown RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 POLE3Q9NRF9 147 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 HPF1Q9NWY4 346 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 EURLQ9NYK6 297 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 GPR83Q9NYM4 423 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 TAS2R13Q9NYV9 303 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 AURKCQ9UQB9 309 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 TP53TG5Q9Y2B4 290 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 UTP11Q9Y3A2 253 aaKnown RBP3.31□□□□□ -1.88
HTT-210ENST00000512909 CSAG2Q9Y5P2 127 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 AP1M2Q9Y6Q5 423 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 PCNX2A6NKB5 2137 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 CHD5Q8TDI0 1954 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 SHROOM3Q8TF72 1996 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 PLXNB3Q9ULL4 1909 aa3.31□□□□□ -1.88
HTT-210ENST00000512909 NCF1BA6NI72 391 aaPredicted RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 WASHC1A8K0Z3 465 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 A8MUI8 341 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 NCF1CA8MVU1 366 aaPredicted RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 C21orf140B9A014 251 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 H0YGG7 62 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 SRPX2O60687 465 aaPredicted RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 PIAS1O75925 651 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 TTC4O95801 387 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 RENP00797 406 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 HEXBP07686 556 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 CCDC159P0C7I6 412 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 MPC1LP0DKB6 136 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 NCF1P14598 390 aaPredicted RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 H2AFXP16104 143 aaPredicted RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 PGAM1P18669 254 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 OGNP20774 298 aaKnown RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 RPS3P23396 243 aaKnown RBP eCLIP3.3□□□□□ -1.88
HTT-210ENST00000512909 PTPN6P29350 595 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 HSD17B2P37059 387 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 SLC1A2P43004 574 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 ARHGDIBP52566 201 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 EMP2P54851 167 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 PLTPP55058 493 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 PPIAP62937 165 aaKnown RBP3.3□□□□□ -1.88
HTT-210ENST00000512909 HSF2Q03933 536 aa3.3□□□□□ -1.88
HTT-210ENST00000512909 ACVR1Q04771 509 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms