RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NR2C1P13056 603 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 TNFRSF1BP20333 461 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF133P52736 654 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 MAD2L1BPQ15013 274 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 CARM1Q86X55 608 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 C3orf56Q8N813 242 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 NANPQ8TBE9 248 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 C10orf82Q8WW14 230 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 SEPHS2Q99611 448 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 SH3GL1Q99961 368 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 ECSITQ9BQ95 431 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 MRPL13Q9BYD1 178 aaKnown RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 PLA2G12AQ9BZM1 189 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 POLR2J2Q9GZM3 115 aaKnown RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 POLR2J3Q9H1A7 115 aaKnown RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 CCDC134Q9H6E4 229 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 MEPEQ9NQ76 525 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 CYSLTR2Q9NS75 346 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 DECR2Q9NUI1 292 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 MRGBPQ9NV56 204 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 MYEF2Q9P2K5 600 aaKnown RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 CGGBP1Q9UFW8 167 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-216ENST00000512683 SH3GLB1Q9Y371 365 aa10.73□□□□□ -0.69
VEGFA-216ENST00000512683 GMNCA6NCL1 334 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 NPIPB13A6NJU9 1138 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 BBIP1A8MTZ0 92 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 CLDN25C9JDP6 229 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 NPIPB4C9JG80 1138 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 H3BSA7 217 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 KPNA4O00629 521 aaPredicted RBP10.72□□□□□ -0.69
VEGFA-216ENST00000512683 SERPINI2O75830 405 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 MPZL1O95297 269 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 LCKP06239 509 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 PATE4P0C8F1 98 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 PGA3P0DJD8 388 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 EPHA1P21709 976 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 DRD4P21917 467 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 TUBG1P23258 451 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 FPR2P25090 351 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 APLNRP35414 380 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 ACTG1P63261 375 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 HFEQ30201 348 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 ZNF718Q3SXZ3 478 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 C1QL2Q7Z5L3 287 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 PEG10Q86TG7 708 aaKnown RBP10.72□□□□□ -0.69
VEGFA-216ENST00000512683 OR4K5Q8NGD3 323 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 FNDC8Q8TC99 324 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 LIPHQ8WWY8 451 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 ELMOD3Q96FG2 381 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 DIRC2Q96SL1 478 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 SH3GL3Q99963 347 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 EGLN1Q9GZT9 426 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 SMURF2Q9HAU4 748 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 NTN4Q9HB63 628 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 TUBG2Q9NRH3 451 aa10.72□□□□□ -0.69
VEGFA-216ENST00000512683 EIF3KQ9UBQ5 218 aaKnown RBP10.72□□□□□ -0.69
VEGFA-216ENST00000512683 A0A1W2PRG6 482 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 WNT9BO14905 357 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 PLPP2O43688 288 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 SHOX2O60902 331 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 DEAF1O75398 565 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 NCR1O76036 304 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 ADH4P08319 380 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 RBM34P42696 430 aaKnown RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 MAGEB1P43366 347 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 OR1E2P47887 323 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 DAP3P51398 398 aaKnown RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 CLRN1P58418 232 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 CCL8P80075 99 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 MRPS34P82930 218 aaKnown RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 TAF11Q15544 211 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 MAPRE2Q15555 327 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 C10orf128Q5T292 105 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 ERICH5Q6P6B1 374 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 NKAIN4Q8IVV8 208 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 RBM15BQ8NDT2 890 aaKnown RBP10.71□□□□□ -0.69
VEGFA-216ENST00000512683 WACQ9BTA9 647 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 LPAR2Q9HBW0 351 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 ARMCX1Q9P291 453 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 RIMS3Q9UJD0 308 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 BAG5Q9UL15 447 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 FZR1Q9UM11 496 aa10.71□□□□□ -0.69
VEGFA-216ENST00000512683 FAM220BPB1ANY3 271 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 SLC22A2O15244 555 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 ICMTO60725 284 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 CLPTM1O96005 669 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 IGHV2-5P01817 119 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 MT-ND1P03886 318 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 TSPAN19P0C672 248 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 FAM157BP0CG42 384 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 ACADSP16219 412 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 ADRA2CP18825 462 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 FUT4P22083 530 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 CPT2P23786 658 aa10.7□□□□□ -0.7
VEGFA-216ENST00000512683 GCH1P30793 250 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms