RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ASB18Q6ZVZ8 466 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 COX15Q7KZN9 410 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 CYB5R4Q7L1T6 521 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF554Q86TJ5 538 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 LACC1Q8IV20 430 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC35F2Q8IXU6 374 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR52N2Q8NGI0 321 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR5M9Q8NGP3 310 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR10X1Q8NGY0 326 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR6N2Q8NGY6 317 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 FNDC8Q8TC99 324 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 P2RX4Q99571 388 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC6A7Q99884 636 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF2Q9BSG1 426 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 ACTR3CQ9C0K3 210 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 VCX3AQ9NNX9 186 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 KLHL21Q9UJP4 597 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 UBQLN1Q9UMX0 589 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 AK6Q9Y3D8 172 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 CHD4Q14839 1912 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 CHD5Q8TDI0 1954 aa5.5□□□□□ -1.53
TRAPPC11-209ENST00000512476 A0A1W2PP11 408 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 SERINC4A6NH21 518 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 H3BNH8 94 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 KLK3P07288 261 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CTSLP07711 333 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 PCSK6P29122 969 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 PCK1P35558 622 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 GSSP48637 474 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CAV2P51636 162 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 HHEXQ03014 270 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 GPR50Q13585 617 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 TAL2Q16559 108 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 RAB6CQ53S08 254 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 DDI2Q5TDH0 399 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 PHF13Q86YI8 300 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CENPSQ8N2Z9 138 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZSCAN4Q8NAM6 433 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 TMEM35BQ8NCS4 154 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC19A3Q9BZV2 496 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 RAB6CQ9H0N0 254 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF703Q9H7S9 590 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 UBE2ZQ9H832 354 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 MOV10Q9HCE1 1003 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 STARD5Q9NSY2 213 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CIDEBQ9UHD4 219 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 OAZ3Q9UMX2 235 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ALG5Q9Y673 324 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 LAMB1P07942 1786 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF646O15015 1829 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLC22A23A1A5C7 686 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 PSMB11A5LHX3 300 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 MYMKA6NI61 221 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 A8MVM7 634 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 FTCDNL1E5RQL4 147 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 SMIM22K7EJ46 135 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 TAPBPO15533 448 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 EIF4E2O60573 245 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 RNASEH1O60930 286 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 NEURL1O76050 574 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ESRRBO95718 433 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 AADACP22760 399 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 DNA2P51530 1060 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR4D2P58180 307 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 PAFAH1B2P68402 229 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CFHR3Q02985 330 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR10J3Q5JRS4 329 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 DNM1P34Q6PK57 102 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 C3orf62Q6ZUJ4 267 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 LHFPL3Q86UP9 236 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 LINC01465Q8N7H1 131 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CCDC54Q8NEL0 328 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 C11orf45Q8TAV5 145 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ACER1Q8TDN7 264 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 CPXM1Q96SM3 734 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 RNF41Q9H4P4 317 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 NOP53Q9NZM5 478 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 TMEM9Q9P0T7 183 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 ZNF337Q9Y3M9 751 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 MYH2Q9UKX2 1941 aa5.49□□□□□ -1.53
TRAPPC11-209ENST00000512476 BAZ2AQ9UIF9 1905 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 A0A1W2PRD5 423 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 A0A1W2PRF3 423 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 A0A1W2PRM7 423 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 HIDE1A8MVS5 230 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 BLOC1S5-TXNDC5H3BN57 136 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 TMEM178BH3BS89 294 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 SIRPB1O00241 398 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 SPRY3O43610 288 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 PRKNO60260 465 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 CBLP22681 906 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 GMPRP36959 345 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR3A3P47888 321 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR3A2P47893 321 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 CX3CR1P49238 355 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 RPL32P62910 135 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 FKBP1AP62942 108 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 OR2G6Q5TZ20 316 aa5.48□□□□□ -1.53
TRAPPC11-209ENST00000512476 FAM45BPQ6NSW5 357 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms