RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NKPD1Q17RQ9 610 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 RPS26P11Q5JNZ5 115 aaPredicted RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 GCNT6Q5T4J0 391 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 AP1ARQ63HQ0 302 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 TYW3Q6IPR3 259 aaKnown RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 NIPAL3Q6P499 406 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 C16orf89Q6UX73 402 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 Q6YL49 198 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 FRRS1Q6ZNA5 592 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 GRINAQ7Z429 371 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 HMGN2P46Q86SG4 172 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 SERPINA11Q86U17 422 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 GPAT4Q86UL3 456 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 FAM156AQ8NDB6 213 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 IL17RDQ8NFM7 739 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 NFKBIDQ8NI38 313 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 ST7LQ8TDW4 575 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 SLC38A5Q8WUX1 472 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 SGCDQ92629 289 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 PPP1R14AQ96A00 147 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 TIMD4Q96H15 378 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 TMEM19Q96HH6 336 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 ECSITQ9BQ95 431 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 MRI1Q9BV20 369 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 SF3B5Q9BWJ5 86 aaKnown RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 SLC38A1Q9H2H9 487 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 RAD21L1Q9H4I0 556 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 TMEM38AQ9H6F2 299 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 A4GALTQ9NPC4 353 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 NKIRAS2Q9NYR9 191 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 ADA2Q9NZK5 511 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 NKX1-2Q9UD57 310 aaPredicted RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 DSPPQ9NZW4 1301 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 TMED7-TICAM2A0A0A6YYA0 188 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 LIPT2A6NK58 231 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 AQP7P3A6NL99 342 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 FAM220BPB1ANY3 271 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 RPL36A-HNRNPH2H7BZ11 118 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 ST8SIA5O15466 376 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 DHHO43323 396 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 CIB2O75838 187 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 ZNF432O94892 652 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 BCHEP06276 602 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 MELTFP08582 738 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 CAPZA2P47755 286 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 CRYBA2P53672 197 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 SH3BGRP55822 239 aaPredicted RBP7.66□□□□□ -1.18
NUP54-211ENST00000512151 CDK6Q00534 326 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 PAX2Q02962 417 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 DBPQ10586 325 aaPredicted RBP7.66□□□□□ -1.18
NUP54-211ENST00000512151 SCARB2Q14108 478 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 KPNB1Q14974 876 aaKnown RBP7.66□□□□□ -1.18
NUP54-211ENST00000512151 ZNF141Q15928 474 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 MAPK14Q16539 360 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 TSTQ16762 297 aaKnown RBP7.66□□□□□ -1.18
NUP54-211ENST00000512151 VMACQ2NL98 169 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 GPAT3Q53EU6 434 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 SPRNQ5BIV9 151 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 PGM2L1Q6PCE3 622 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 Q6ZSV7 163 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 CREB3L2Q70SY1 520 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 ARPINQ7Z6K5 226 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 MICU2Q8IYU8 434 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 FAM71CQ8NEG0 241 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 OR10S1Q8NGN2 331 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 PHF21AQ96BD5 680 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 UPRTQ96BW1 309 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 SH3GL1Q99961 368 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 SLC30A2Q9BRI3 323 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 THTPAQ9BU02 230 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 LINC00470Q9BZP3 86 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 ZNF350Q9GZX5 532 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 GPR35Q9HC97 309 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 SPAG4Q9NPE6 437 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 EXD2Q9NVH0 621 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 MKLN1Q9UL63 735 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 CORO2BQ9UQ03 480 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 TMED7Q9Y3B3 224 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 NOX1Q9Y5S8 564 aa7.66□□□□□ -1.18
NUP54-211ENST00000512151 GPR137BO60478 399 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 UGT2B17O75795 530 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 AGR2O95994 175 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 NR2F1P10589 423 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 HSD17B1P14061 328 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 NCK1P16333 377 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 ACTR3P61158 418 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 ERVS71-1P61550 626 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 TXNL4AP83876 142 aaKnown RBP7.65□□□□□ -1.18
NUP54-211ENST00000512151 MS4A2Q01362 244 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 TEKQ02763 1124 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 PIGFQ07326 219 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 OR7A5Q15622 319 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 GPR68Q15743 365 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 CYP51A1Q16850 503 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 CEACAM16Q2WEN9 425 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 HFEQ30201 348 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 PCGF3Q3KNV8 242 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 ATAD3BQ5T9A4 648 aa7.65□□□□□ -1.18
NUP54-211ENST00000512151 TMEM154Q6P9G4 183 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms