RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, human

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-215	ENST00000511843	DOK1	Q99704	481 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	GPA33	Q99795	319 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	TPK1	Q9H3S4	243 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	ANKRD19P	Q9H560	264 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	DYNLRB1	Q9NP97	96 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	CMAHP	Q9Y471	501 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	NAV3	Q8IVL0	2385 aa		11.45	□□□□□ -0.58
RNF4-215	ENST00000511843	ABCA2	Q9BZC7	2435 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843		A0A1W2PPL8	197 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	HTR3E	A5X5Y0	456 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843		B2RBV5	119 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	CENPBD1	B2RD01	187 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	MGRN1	O60291	552 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	SCG5	P05408	212 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	ADRA2A	P08913	450 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	ZNF32	P17041	273 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	ATP6V1B2	P21281	511 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	APEX1	P27695	318 aa	Known RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	OMP	P47874	163 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	PPOX	P50336	477 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	FXYD6P3	P58550	94 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	MRPS34	P82930	218 aa	Known RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	GALK2	Q01415	458 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	SPIB	Q01892	262 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	KRT72	Q14CN4	511 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	TAF11	Q15544	211 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	SLC36A2	Q495M3	483 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	MEST	Q5EB52	335 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	PABPC1L2A	Q5JQF8	200 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	CYP2R1	Q6VVX0	501 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	RINL	Q6ZS11	566 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	ARIH2OS	Q8N7S6	290 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	CPEB3	Q8NE35	698 aa	Known RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	AKR7L	Q8NHP1	331 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	MRPL24	Q96A35	216 aa	Known RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	RSRC1	Q96IZ7	334 aa	Known RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	DHRS1	Q96LJ7	313 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	FUZ	Q9BT04	418 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	ALG12	Q9BV10	488 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	SMURF2	Q9HAU4	748 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	CDH20	Q9HBT6	801 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	STX18	Q9P2W9	335 aa	Known RBP	11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	TMEM5	Q9Y2B1	443 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	FKBP7	Q9Y680	259 aa		11.44	□□□□□ -0.58
RNF4-215	ENST00000511843	MALRD1	Q5VYJ5	2156 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	HIVEP2	P31629	2446 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	TEX13C	A0A0J9YWL9	993 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843		A6NIZ1	184 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	FAM107A	O95990	144 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	CD14	P08571	375 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	LAP3	P28838	519 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	ALDH3B1	P43353	468 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	RAP1B	P61224	184 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	RAP1A	P62834	184 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	HSF2	Q03933	536 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	DBP	Q10586	325 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	ALKBH6	Q3KRA9	238 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	THEM4	Q5T1C6	240 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	FAM122B	Q7Z309	247 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	CCDC197	Q8NCU1	140 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	ICA1L	Q8NDH6	482 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	NSL1	Q96IY1	281 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	ZNF570	Q96NI8	536 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	RBP7	Q96R05	134 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	SIAE	Q9HAT2	523 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	EMC7	Q9NPA0	242 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	CCNB1IP1	Q9NPC3	277 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	GRHPR	Q9UBQ7	328 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	DUSP13	Q9UII6	198 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	ADAM21	Q9UKJ8	722 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	FBXL3	Q9UKT7	428 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	AURKC	Q9UQB9	309 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	SIGLEC7	Q9Y286	467 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	SPEF1	Q9Y4P9	236 aa		11.43	□□□□□ -0.58
RNF4-215	ENST00000511843	IQCM	A0A1B0GVH7	501 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	UNC119B	A6NIH7	251 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	VSTM5	A8MXK1	200 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	LYNX1	G3V0Z9	82 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	SOCS2	O14508	198 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	ENTPD5	O75356	428 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	PTP4A3	O75365	173 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	GADD45G	O95257	159 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	CLPTM1	O96005	669 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	TP53	P04637	393 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	FABP3	P05413	133 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	LYNX1	P0DP58	116 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	CCNO	P22674	350 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	GLRX	P35754	106 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	PDLIM4	P50479	330 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	DSCR9	P59020	149 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	PLP2	Q04941	152 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	KRR1	Q13601	381 aa	Known RBP	11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	ENDOG	Q14249	297 aa	Known RBP	11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	GGTLC2	Q14390	218 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	TBC1D28	Q2M2D7	210 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	ANKDD1A	Q495B1	522 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	NRN1L	Q496H8	165 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	FAM205BP	Q63HN1	556 aa		11.42	□□□□□ -0.58
RNF4-215	ENST00000511843	UGT2A3	Q6UWM9	527 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms