RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	UFD1	Q92890	307 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	TMEM54	Q969K7	222 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ISOC1	Q96CN7	298 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	NMD3	Q96D46	503 aa	Known RBP	10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ZMYND19	Q96E35	227 aa	Predicted RBP	10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ALG8	Q9BVK2	526 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	FUNDC2	Q9BWH2	189 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	NUAK2	Q9H093	628 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	RBM38	Q9H0Z9	239 aa	Known RBP	10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ADGRL4	Q9HBW9	690 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ISYNA1	Q9NPH2	558 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	GLRX2	Q9NS18	164 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ERVK13-1	Q9NX77	482 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	EMC3	Q9P0I2	261 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	B9D1	Q9UPM9	204 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	NOSIP	Q9Y314	301 aa	Known RBP	10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	CAB39	Q9Y376	341 aa	Predicted RBP	10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	FAM215A	Q9Y5M1	114 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	TMEM14A	Q9Y6G1	99 aa		10.44	□□□□□ -0.74
APBB3-217	ENST00000511459	ALPK2	Q86TB3	2170 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	GTF3C1	Q12789	2109 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MBD3L3	A6NE82	208 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	FAM171A2	A8MVW0	826 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	SLC16A7	O60669	478 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	SS18L1	O75177	396 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	SLC43A1	O75387	559 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MRPL33	O75394	65 aa	Known RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MT-ND5	P03915	603 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	CTLA4	P16410	223 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	PYCR1	P32322	319 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	CSNK1A1	P48729	337 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	ETV1	P50549	477 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	TAS2R43	P59537	309 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	GLO1	Q04760	184 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	RBPJ	Q06330	500 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	FMOD	Q06828	376 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	GUSBP1	Q15486	140 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	TST	Q16762	297 aa	Known RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	PHYHD1	Q5SRE7	291 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	THEM4	Q5T1C6	240 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	B3GLCT	Q6Y288	498 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	SLC16A9	Q7RTY1	509 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	NUFIP2	Q7Z417	695 aa	Known RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	FAM220A	Q7Z4H9	259 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	LHFPL3	Q86UP9	236 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	ZBTB46	Q86UZ6	589 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	C20orf196	Q8IYI0	205 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	ALDH16A1	Q8IZ83	802 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	ST6GALNAC3	Q8NDV1	305 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	OR51L1	Q8NGJ5	315 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	KISS1R	Q969F8	398 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	MCHR2	Q969V1	340 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	INTS12	Q96CB8	462 aa	Known RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	TM9SF2	Q99805	663 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	TP63	Q9H3D4	680 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	TRIM36	Q9NQ86	728 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	PARPBP	Q9NWS1	579 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	TAS2R16	Q9NYV7	291 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	GLTP	Q9NZD2	209 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	PTTG2	Q9NZH5	202 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	ENPP5	Q9UJA9	477 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	SVIL	O95425	2214 aa		10.43	□□□□□ -0.74
APBB3-217	ENST00000511459	IGLV1-36	A0A0B4J1U3	117 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	IGKV1D-43	A0A0B4J1Z2	117 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	SLC22A1	O15245	554 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	KHDRBS3	O75525	346 aa	Known RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	UPK3A	O75631	287 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	SCG5	P05408	212 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	QDPR	P09417	244 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	LIMS3	P0CW19	117 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	LIMS4	P0CW20	117 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	EDNRA	P25101	427 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	PSMA1	P25786	263 aa	Known RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	AGTR1	P30556	359 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	NAA10	P41227	235 aa	Predicted RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	ZNF133	P52736	654 aa	Predicted RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	GALE	Q14376	348 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	ETFDH	Q16134	617 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	LINC01590	Q5TEZ4	76 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	OR2A2	Q6IF42	318 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	LRFN4	Q6PJG9	635 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	SLC25A47	Q6Q0C1	308 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	C3P1	Q6ZMU1	363 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	ERI1	Q8IV48	349 aa	Known RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	RPRML	Q8N4K4	120 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	OR6N1	Q8NGY5	312 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	HAVCR2	Q8TDQ0	301 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	SNX33	Q8WV41	574 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	C12orf43	Q96C57	262 aa	Known RBP	10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	YIPF6	Q96EC8	236 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	OR5M11	Q96RB7	305 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	INTS14	Q96SY0	518 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	TSC22D3	Q99576	134 aa		10.42	□□□□□ -0.74
APBB3-217	ENST00000511459	TBX5	Q99593	518 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms