RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CTLA4P16410 223 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 ZNF3P17036 446 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 MSR1P21757 451 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 IGFBP5P24593 272 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 POU1F1P28069 291 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 LOXP28300 417 aaPredicted RBP11.22□□□□□ -0.61
COL6A6-203ENST00000511332 GRK5P34947 590 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 CDKN2AP42771 156 aaKnown RBP11.22□□□□□ -0.61
COL6A6-203ENST00000511332 DAPP51397 102 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 TUBA1BP68363 451 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 TUBA4AP68366 448 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 SLC35F1Q5T1Q4 408 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 TMEM53Q6P2H8 277 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 ZNF704Q6ZNC4 412 aaPredicted RBP11.22□□□□□ -0.61
COL6A6-203ENST00000511332 FOXL2NBQ6ZUU3 175 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 TUBA1AQ71U36 451 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 MDP1Q86V88 176 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 CDC20BQ86Y33 519 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 GLB1L2Q8IW92 636 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 PQLC1Q8N2U9 271 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 OR52E2Q8NGJ4 325 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 OR4Q3Q8NH05 313 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 RADILQ96JH8 1075 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 NMNAT3Q96T66 252 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 RBM4BQ9BQ04 359 aaKnown RBP11.22□□□□□ -0.61
COL6A6-203ENST00000511332 KCNS3Q9BQ31 491 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 TMEM204Q9BSN7 226 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 RBM4Q9BWF3 364 aaKnown RBP11.22□□□□□ -0.61
COL6A6-203ENST00000511332 PRRG3Q9BZD7 231 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 RACGAP1Q9H0H5 632 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 SEC61A2Q9H9S3 476 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 SIAEQ9HAT2 523 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 EDARQ9UNE0 448 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 SETXQ7Z333 2677 aaKnown RBP11.21□□□□□ -0.61
COL6A6-203ENST00000511332 ABCD4O14678 606 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 IGLV1-44P01699 117 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 IGFBP1P08833 259 aaPredicted RBP11.21□□□□□ -0.61
COL6A6-203ENST00000511332 CD40P25942 277 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 LAP3P28838 519 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 CDAP32320 146 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 ESRRGP62508 458 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 GLO1Q04760 184 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 NPRL3Q12980 569 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 SGCAQ16586 387 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 KDM4DQ6B0I6 523 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 SKA3Q8IX90 412 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 DEPDC4Q8N2C3 294 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 IQCF1Q8N6M8 205 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 LURAP1Q96LR2 239 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 SH3GL3Q99963 347 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 WACQ9BTA9 647 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 C1QTNF6Q9BXI9 259 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 NUAK2Q9H093 628 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 RERGLQ9H628 205 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 SLC25A19Q9HC21 320 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 CCNB1IP1Q9NPC3 277 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 RPRD1BQ9NQG5 326 aaKnown RBP11.21□□□□□ -0.61
COL6A6-203ENST00000511332 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 CMC2Q9NRP2 79 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 B3GNT2Q9NY97 397 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 ZNF224Q9NZL3 707 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 ORC6Q9Y5N6 252 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 FKBP7Q9Y680 259 aa11.21□□□□□ -0.61
COL6A6-203ENST00000511332 ABCA4P78363 2273 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 FBN2P35556 2912 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 ANKRD17O75179 2603 aaKnown RBP11.2□□□□□ -0.62
COL6A6-203ENST00000511332 IGLV1-36A0A0B4J1U3 117 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 IGHV1-18A0A0C4DH31 117 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF503-AS2A6NEH8 195 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 DPRXA6NFQ7 191 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 HMGN1P05114 100 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 CST2P09228 141 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 CECR9P0C854 216 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 PAICSP22234 425 aaKnown RBP11.2□□□□□ -0.62
COL6A6-203ENST00000511332 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
COL6A6-203ENST00000511332 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
COL6A6-203ENST00000511332 CRISP1P54107 249 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 PCBD1P61457 104 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 RAB1AP62820 205 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 PPP2R2BQ00005 443 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 GINS1Q14691 196 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 FAM27BQ5VT28 67 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 ADAM5Q6NVV9 412 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 SLC22A25Q6T423 547 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 ZBTB46Q86UZ6 589 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 LRRC18Q8N456 261 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 SLC37A3Q8NCC5 494 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 NPEPL1Q8NDH3 523 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 OR2T4Q8NH00 348 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 HTRA1Q92743 480 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 CIB1Q99828 191 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 C9orf16Q9BUW7 83 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 C1orf198Q9H425 327 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 RNF121Q9H920 327 aa11.2□□□□□ -0.62
COL6A6-203ENST00000511332 APCP25054 2843 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 OR6C68A6NDL8 312 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 C12orf71A8MTZ7 269 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 ANKRD65E5RJM6 399 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms