RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ALG10Q5BKT4 473 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 C10orf128Q5T292 105 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC25A47Q6Q0C1 308 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 UGT2A3Q6UWM9 527 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF730Q6ZMV8 503 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF620Q6ZNG0 422 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ASRGL1Q7L266 308 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 SKA3Q8IX90 412 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 SYT14Q8NB59 555 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 OR4Q3Q8NH05 313 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 MAGEE2Q8TD90 523 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNRF4Q8WWF5 429 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 LZICQ8WZA0 190 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 HSD17B8Q92506 261 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 AKAP1Q92667 903 aaKnown RBP eCLIP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 MCHR2Q969V1 340 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 MBD6Q96DN6 1003 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 LRRC46Q96FV0 321 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC25A44Q96H78 314 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 LRR1Q96L50 414 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 HS6ST2Q96MM7 605 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 FOXN4Q96NZ1 517 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 FOXB1Q99853 325 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 KATNB1Q9BVA0 655 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ULBP2Q9BZM5 246 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 FN3KQ9H479 309 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 MAGIXQ9H6Y5 334 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 EGLN3Q9H6Z9 239 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 NTN4Q9HB63 628 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 INIPQ9NRY2 104 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 TMEM38BQ9NVV0 291 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 NDE1Q9NXR1 346 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF226Q9NYT6 803 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 GLTPQ9NZD2 209 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 NDRG3Q9UGV2 375 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 RNF115Q9Y4L5 304 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 SVEP1Q4LDE5 3571 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 CUBNO60494 3623 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ABCA2Q9BZC7 2435 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 IGHV2OR16-5A0A0B4J2B6 119 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 CIB4A0PJX0 185 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 DHHO43323 396 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 GPRIN2O60269 458 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ALX3O95076 343 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 GADD45GO95257 159 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 PPP1R3DO95685 299 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 RAF1P04049 648 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 GAAP10253 952 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 SAGP10523 405 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ACADSP16219 412 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 CPEP16870 476 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF14P17017 642 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 IDH3GP51553 393 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 HMGA2P52926 109 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 CDH11P55287 796 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 CTXN1P60606 82 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 NKX6-1P78426 367 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 KRR1Q13601 381 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ENDOGQ14249 297 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 DEFB113Q30KQ7 82 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 HMBOX1Q6NT76 420 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ANKRD16Q6P6B7 361 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF813Q6ZN06 617 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 DHFR2Q86XF0 187 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ARHGAP24Q8N264 748 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 GPR137CQ8N3F9 429 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 WFDC11Q8NEX6 87 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 FANK1Q8TC84 345 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF566Q969W8 418 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC38A2Q96QD8 506 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ALPK1Q96QP1 1244 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 DDOQ99489 341 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 SH3GL3Q99963 347 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 NIPSNAP1Q9BPW8 284 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 TRAF4Q9BUZ4 470 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 HDHD5Q9BXW7 423 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 TXNIPQ9H3M7 391 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 MUC13Q9H3R2 512 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 NRIP3Q9NQ35 241 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 DLL4Q9NR61 685 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 PARPBPQ9NWS1 579 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 UPB1Q9UBR1 384 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 AMDHD2Q9Y303 409 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 DSCAMO60469 2012 aa6.24□□□□□ -1.41
TOPBP1-207ENST00000509162 ARFGEF3Q5TH69 2177 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 IGLV1-36A0A0B4J1U3 117 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 DHRS12A0PJE2 317 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC22A23A1A5C7 686 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 UNC119BA6NIH7 251 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 AQP12BA6NM10 295 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 H3BNX3 289 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 OVOL3O00110 214 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 BHLHE40O14503 412 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 GYG2O15488 501 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 AKAP8O43823 692 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 FKBP6O75344 327 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 MPZL1O95297 269 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 SOX14O95416 240 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 TXNDC12O95881 172 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 IGHG1P01857 330 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms