RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAM86B1Q8N7N1 296 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 ACOT11Q8WXI4 607 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 FAM46AQ96IP4 442 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 SEPHS2Q99611 448 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 CCNB1IP1Q9NPC3 277 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 SPAG4Q9NPE6 437 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 ABCD2Q9UBJ2 740 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 UGT2A1Q9Y4X1 527 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 RTTNQ86VV8 2226 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 CUBNO60494 3623 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 IQCMA0A1B0GVH7 501 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 A0A1W2PPL8 197 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 NDUFS8O00217 210 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 NDUFAB1O14561 156 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 CDC42EP2O14613 210 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 SYNGR3O43761 229 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 PRSS23O95084 383 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 STAMBPO95630 424 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 LCKP06239 509 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 MSX2P35548 267 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 RPL4P36578 427 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC9A3P48764 834 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 ERVK-25P63136 954 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 PLP2Q04941 152 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 TBC1D28Q2M2D7 210 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 PABPC1L2AQ5JQF8 200 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 CYB5R2Q6BCY4 276 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 MBOAT2Q6ZWT7 520 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 LRRC75AQ8NAA5 344 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 AKR7LQ8NHP1 331 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 NEU4Q8WWR8 484 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 NABP1Q96AH0 204 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 NMD3Q96D46 503 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 KCNN2Q9H2S1 579 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 CHODLQ9H9P2 273 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 NMNAT1Q9HAN9 279 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 MYOZ1Q9NP98 299 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 REV1Q9UBZ9 1251 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 RPS6KA6Q9UK32 745 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 ADAM18Q9Y3Q7 739 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 ENPP4Q9Y6X5 453 aa12.73□□□□□ -0.37
UBE2D3-228ENST00000508974 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 LRP5LA4QPB2 252 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 CENPBD1B2RD01 187 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 CLPTM1O96005 669 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 IGHMP01871 453 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 MMP7P09237 267 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 NAT2P11245 290 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF32P17041 273 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 PRDX6P30041 224 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 APLNRP35414 380 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 MRPS34P82930 218 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 FHL1Q13642 323 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 RGS7BPQ6MZT1 257 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 PODNL1Q6PEZ8 512 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC25A47Q6Q0C1 308 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 CPEB3Q8NE35 698 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF519Q8TB69 540 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 UBASH3BQ8TF42 649 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 RBP7Q96R05 134 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 SIAEQ9HAT2 523 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 IL20RAQ9UHF4 553 aa12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 FBXO9Q9UK97 447 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 FAM32AQ9Y421 112 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-228ENST00000508974 NPIPB13A6NJU9 1138 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 NPIPB4C9JG80 1138 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 GMNNO75496 209 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 PTHP01270 115 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 H1F0P07305 194 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 NR2C1P13056 603 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF26P17031 533 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 LAP3P28838 519 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF133P52736 654 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 GLO1Q04760 184 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 TAF11Q15544 211 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 NKPD1Q17RQ9 610 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 CHRFAM7AQ494W8 412 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 NRN1LQ496H8 165 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 ZBED5Q49AG3 693 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 IL17RELQ6ZVW7 336 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 DPPA2Q7Z7J5 298 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 HIPK1Q86Z02 1210 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 ARIH2OSQ8N7S6 290 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 OR52J3Q8NH60 311 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC7A13Q8TCU3 470 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 Q96M85 177 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 SNX18Q96RF0 628 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 SOX7Q9BT81 388 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 ALG12Q9BV10 488 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 C1orf198Q9H425 327 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 SMURF2Q9HAU4 748 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 ARL8BQ9NVJ2 186 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 TAAR3PQ9P1P4 343 aa12.71□□□□□ -0.37
UBE2D3-228ENST00000508974 SAMD4AQ9UPU9 718 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms