RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 BGLAPP02818 100 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 HKR1P10072 659 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 ETS2P15036 469 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 B4GALT1P15291 398 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 GATA3P23771 443 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 HTR2AP28223 471 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 PRKAR1BP31321 381 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 MAGEB1P43366 347 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 PTDSS1P48651 473 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 UBA52P62987 128 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 GALK2Q01415 458 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 IFFO1Q0D2I5 559 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 FOXL1Q12952 345 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 STX3Q13277 289 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 CAMK2DQ13557 499 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 RAB39AQ14964 217 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 PCGF3Q3KNV8 242 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 TM4SF20Q53R12 229 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 GKAP1Q5VSY0 366 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 CARD17Q5XLA6 110 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 ULK3Q6PHR2 472 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 MSANTD1Q6ZTZ1 278 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 SNX32Q86XE0 403 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 SKA3Q8IX90 412 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 FGFBP3Q8TAT2 258 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 VPS33AQ96AX1 596 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 NEIL1Q96FI4 390 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 ZBTB18Q99592 522 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 SSBP3Q9BWW4 388 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 NTN4Q9HB63 628 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 MSL2Q9HCI7 577 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 A4GALTQ9NPC4 353 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 HINT3Q9NQE9 182 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 MED29Q9NX70 200 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 MRPL39Q9NYK5 338 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 TAAR3PQ9P1P4 343 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 RPS6KB2Q9UBS0 482 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 OPN4Q9UHM6 478 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 FZR1Q9UM11 496 aa7.31□□□□□ -1.24
COL4A3BP-206ENST00000508809 PPIAL4EA0A075B759 164 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PPIAL4CA0A0B4J2A2 164 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 SLC22A23A1A5C7 686 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 TMEM247A6NEH6 219 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ZNF726A6NNF4 738 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PPIAL4DF5H284 164 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PLPP3O14495 311 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 CDC14BO60729 498 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 RAB36O95755 333 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 CLPTM1O96005 669 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 IGHV2-5P01817 119 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PATE4P0C8F1 98 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PPIAL4FP0DN26 164 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ADRA2CP18825 462 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 BGNP21810 368 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 CBLP22681 906 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 EPHA3P29320 983 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 SELENOVP59797 346 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 CCL8P80075 99 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PUDPQ08623 228 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 BST1Q10588 318 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 FADDQ13158 208 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 RGNQ15493 299 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 GTDC1Q4AE62 458 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PDLIM3Q53GG5 364 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ALG10BQ5I7T1 473 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 TMEM200BQ69YZ2 307 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 RGS7BPQ6MZT1 257 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 DHRS4L2Q6PKH6 230 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 WDR88Q6ZMY6 472 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 COMTD1Q86VU5 262 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PAQR4Q8N4S7 273 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 OR6N1Q8NGY5 312 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 BBS10Q8TAM1 723 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ZNF519Q8TB69 540 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 MGARPQ8TDB4 240 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 GTF2H4Q92759 462 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 TMEM54Q969K7 222 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 MAL2Q969L2 176 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 LRRC58Q96CX6 371 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 RAB39BQ96DA2 213 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 SLC47A1Q96FL8 570 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ITCHQ96J02 903 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 MAELQ96JY0 434 aaKnown RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 EPYCQ99645 322 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 SLC6A7Q99884 636 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ULBP2Q9BZM5 246 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 MEGF9Q9H1U4 602 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 WDR55Q9H6Y2 383 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 RMND5AQ9H871 391 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 CACYBPQ9HB71 228 aaKnown RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 SDR39U1Q9NRG7 319 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 SLCO1C1Q9NYB5 712 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 ZIM2Q9NZV7 527 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 MYRFQ9Y2G1 1151 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 WIPI2Q9Y4P8 454 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 PCDHGB1Q9Y5G3 927 aa7.3□□□□□ -1.24
COL4A3BP-206ENST00000508809 NOTCH1P46531 2555 aa7.29□□□□□ -1.24
COL4A3BP-206ENST00000508809 A0A0B4J2E0 115 aa7.29□□□□□ -1.24
COL4A3BP-206ENST00000508809 IGHV1-69-2A0A0G2JMI3 117 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms