RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CLUHP3Q96NS8 147 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 VN1R1Q9GZP7 353 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 WDR55Q9H6Y2 383 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CRLF2Q9HC73 371 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SAR1AQ9NR31 198 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 UBQLN4Q9NRR5 601 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SMOXQ9NWM0 555 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NPFFR2Q9Y5X5 522 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MED13LQ71F56 2210 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 A8MVM7 634 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 C9orf172C9J069 976 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ITGB1BP1O14713 200 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SCAMP2O15127 329 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CTNSO60931 367 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SLCO2B1O94956 709 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 AHSGP02765 367 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OPN1SWP03999 348 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 IFNA4P05014 189 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FABP1P07148 127 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CRHR1P34998 444 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ADRA1AP35348 466 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LIMS1P48059 325 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CEBPDP49716 269 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PCBP3P57721 371 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SEC61A1P61619 476 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CNN3Q15417 329 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR4D1Q15615 310 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MICAQ29983 383 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RHBDD2Q6NTF9 364 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FCRLAQ7L513 359 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZSWIM9Q86XI8 627 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RNF130Q86XS8 419 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LACC1Q8IV20 430 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ADGRF3Q8IZF5 1079 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RDH10Q8IZV5 341 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 COMMD1Q8N668 190 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LILRA3Q8N6C8 439 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DEFB108BQ8NET1 73 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR10G2Q8NGC3 310 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RHEBL1Q8TAI7 183 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LINC01560Q8TB33 94 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ST8SIA2Q92186 375 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PIGTQ969N2 578 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM186Q96B77 213 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GPR22Q99680 433 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MTHFD2LQ9H903 347 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TPT1P8Q9HAU6 139 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PILRAQ9UKJ1 303 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CNOT11Q9UKZ1 510 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PRELID3BQ9Y3B1 194 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CMAHPQ9Y471 501 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ACACBO00763 2458 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TCRBV7S2A1N4TA0A589 114 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 B4DXG7 233 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF814B7Z6K7 855 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 UGDHO60701 494 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ENTPD6O75354 484 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DKK1O94907 266 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 AIFM1O95831 613 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 APOA2P02652 100 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MT-ND2P03891 347 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FCER2P06734 321 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GRPP07492 148 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PET100P0DJ07 73 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SELEP16581 610 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PRPH2P23942 346 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 HTR2AP28223 471 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DUSP8Q13202 625 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FAHD2BQ6P2I3 314 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CFAP77Q6ZQR2 320 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 VTCN1Q7Z7D3 282 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 HMGN2P46Q86SG4 172 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NOXA1Q86UR1 476 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF584Q8IVC4 421 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LILRA2Q8N149 483 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RBMXL3Q8N7X1 1067 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CCDC71LQ8N9Z2 235 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 C1orf162Q8NEQ5 155 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR2T33Q8NG76 320 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LILRB4Q8NHJ6 448 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ALG3Q92685 438 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 HAS2Q92819 552 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FAHD2AQ96GK7 314 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 COX14Q96I36 57 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 C7orf50Q9BRJ6 194 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM109Q9BVC6 243 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ATG5Q9H1Y0 275 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PLEKHJ1Q9NW61 149 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TRAPPC2LQ9UL33 140 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PCDHGA9Q9Y5G4 932 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ALG5Q9Y673 324 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 A0A087WV62 115 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 A0A087WZY1 265 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CD8B2A6NJW9 211 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PHYHO14832 338 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NME2P1O60361 137 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CBR3O75828 277 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DXOO77932 396 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RAF1P04049 648 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 KITLGP21583 273 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 309.8 ms