RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TMEFF2Q9UIK5 374 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 A4GNTQ9UNA3 340 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 HIF3AQ9Y2N7 669 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 MED31Q9Y3C7 131 aa11.12□□□□□ -0.63
HMGCS1-205ENST00000508319 LOC100653049A0A140TA62 436 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 IQCMA0A1B0GVH7 501 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 C17orf100A8MU93 164 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 B4DSR2 109 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 FAM157AC9JC47 383 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 MGRN1O60291 552 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 KRT34O76011 436 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 LCKP06239 509 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 KDELR2P33947 212 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 WNT5AP41221 380 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 UCP2P55851 309 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 HSF2Q03933 536 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 CD47Q08722 323 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 TOP3AQ13472 1001 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 PABPC1L2AQ5JQF8 200 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 UGT2A3Q6UWM9 527 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 RINLQ6ZS11 566 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 CLDN22Q8N7P3 220 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 PCYOX1LQ8NBM8 494 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 SYNPRQ8TBG9 265 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 GTF3AQ92664 365 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 TPD52L3Q96J77 140 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 SIAEQ9HAT2 523 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 HINT3Q9NQE9 182 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 MAN2C1Q9NTJ4 1040 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 GID8Q9NWU2 228 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 GMPR2Q9P2T1 348 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 CAPN7Q9Y6W3 813 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 TENM1Q9UKZ4 2725 aa11.11□□□□□ -0.63
HMGCS1-205ENST00000508319 ELOVL7A1L3X0 281 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 IGHMP01871 453 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 TFP02787 698 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 IFI30P13284 250 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF32P17041 273 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 STOMP27105 288 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 APLNRP35414 380 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 RAD52P43351 418 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 TMEM33P57088 247 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 SELENOWP63302 87 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 CCL8P80075 99 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 PLP2Q04941 152 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ST3GAL3Q11203 375 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 FHL1Q13642 323 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ALG10Q5BKT4 473 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 TMEM255AQ5JRV8 349 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 VTCN1Q7Z7D3 282 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 GLCCI1Q86VQ1 547 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF101Q8IZC7 436 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 OFCC1Q8IZS5 231 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 LRRC75AQ8NAA5 344 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 SNX33Q8WV41 574 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 C11orf40Q8WZ69 217 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 RCN3Q96D15 328 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 BPIFA2Q96DR5 249 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ZNF416Q9BWM5 594 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 LRMDAQ9H2I8 198 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 SLCO1C1Q9NYB5 712 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 ARMCX1Q9P291 453 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 GPR160Q9UJ42 338 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 SNX13Q9Y5W8 968 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
HMGCS1-205ENST00000508319 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 GMNCA6NCL1 334 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 FFAR1O14842 300 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 PPIHO43447 177 aaKnown RBP11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 GAAP10253 952 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 NR2C1P13056 603 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 MAKP20794 623 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 SRP14P37108 136 aaKnown RBP11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 SELENOVP59797 346 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 RPL27P61353 136 aaKnown RBP11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 LMO4P61968 165 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 ERVK-25P63136 954 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 GLO1Q04760 184 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 TAF11Q15544 211 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 TMEM154Q6P9G4 183 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 IGFN1Q86VF2 1251 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 MEX3DQ86XN8 651 aaKnown RBP11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 NRMQ8IXM6 262 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 RFLNBQ8N5W9 214 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 POU5F2Q8N7G0 328 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 OR1J1Q8NGS3 322 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 NSMAFQ92636 917 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 POM121L2Q96KW2 1035 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 ALG12Q9BV10 488 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 LPAR2Q9HBW0 351 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms