RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FZR1Q9UM11 496 aa6.63□□□□□ -1.35
PDGFRA-206ENST00000508170 SNX24Q9Y343 169 aa6.63□□□□□ -1.35
PDGFRA-206ENST00000508170 ALG5Q9Y673 324 aa6.63□□□□□ -1.35
PDGFRA-206ENST00000508170 NCANO14594 1321 aa6.63□□□□□ -1.35
PDGFRA-206ENST00000508170 ASPDHA6ND91 283 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 CXorf65A6NEN9 183 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 RNF212BA8MTL3 300 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PROB1E7EW31 1015 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ZNF195O14628 629 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PFDN6O15212 129 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SEMA7AO75326 666 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 RP2O75695 350 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SOX30O94993 753 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PRSS56P0CW18 603 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 C8orf88P0DMB2 117 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 HOXB4P17483 251 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 AKR1C4P17516 323 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 RPS12P25398 132 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 HTR1FP30939 366 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 RCVRNP35243 200 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ARR3P36575 388 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SGSHP51688 502 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 GNG11P61952 73 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ELF3P78545 371 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PRKCDQ05655 676 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 MAD2L1Q13257 205 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ATXN7L3Q14CW9 347 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC25A52Q3SY17 297 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 CD300LDQ6UXZ3 194 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 IL17DQ8TAD2 202 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SDR42E1Q8WUS8 393 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 XAGE5Q8WWM1 108 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 RAB8BQ92930 207 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ARL6Q9H0F7 186 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 C1orf167Q5SNV9 1468 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PRAMEF33A0A0G2JMD5 474 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SRRM4A7MD48 611 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 KPNA4O00629 521 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PLPP1O14494 284 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PLPP3O14495 311 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 PRAMEF10O60809 474 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC35G4P0C7Q5 338 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 JUNBP17275 347 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 CELP19835 753 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 APOBEC1P41238 236 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 TAS2R41P59536 307 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SUMO2P61956 95 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ASAH1Q13510 395 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ISXQ2M1V0 245 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 LRRC55Q6ZSA7 311 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ANKRD37Q7Z713 158 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ZNF589Q86UQ0 364 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC35F2Q8IXU6 374 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 BLIDQ8IZY5 108 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 MS4A15Q8N5U1 240 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 TMEM99Q8N816 258 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 OR8J3Q8NGG0 315 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 NTNG2Q96CW9 530 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 EPYCQ99645 322 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 GPR22Q99680 433 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 BTBD10Q9BSF8 475 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 ACTR6Q9GZN1 396 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC25A51Q9H1U9 297 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC25A37Q9NYZ2 338 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 LOXL2Q9Y4K0 774 aa6.62□□□□□ -1.35
PDGFRA-206ENST00000508170 DCCP43146 1447 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 XIRP1Q702N8 1843 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GLYATL1P3A0A0U1RQE8 302 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC22A23A1A5C7 686 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 CDIPTO14735 213 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 TRIAP1O43715 76 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 PRKCGP05129 697 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 NGFRP08138 427 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 HIST1H1EP10412 219 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 AOC1P19801 751 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 IMPDH1P20839 514 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GPX3P22352 226 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC6A1P30531 599 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 QARSP47897 775 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 OR10A3P58181 314 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 OR1C1Q15619 314 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SPIN4Q56A73 249 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 LANCL3Q6ZV70 420 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 LGI2Q8N0V4 545 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 BEST3Q8N1M1 668 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 ARL14EPQ8N8R7 260 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 COQ8AQ8NI60 647 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SMIM19Q96E16 107 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 CCDC126Q96EE4 140 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 L3HYPDHQ96EM0 354 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GPHA2Q96T91 129 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 TRIM51Q9BSJ1 452 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 NT5DC2Q9H857 520 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 POLD4Q9HCU8 107 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 AGPAT4Q9NRZ5 378 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GKN1Q9NS71 199 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 HHLA2Q9UM44 414 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 PP2D1A8MPX8 630 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms