RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 LIPT2A6NK58 231 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TTC36A6NLP5 189 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM114B3SHH9 223 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 SLC28A1O00337 649 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 MANBAO00462 879 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 OR7A17O14581 309 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 HDAC3O15379 428 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 OR10H3O60404 316 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 NPHS1O60500 1241 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PLIN3O60664 434 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 EIF1BO60739 113 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TRIM13O60858 407 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 KRT33AO76009 404 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 OR4F21O95013 312 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 AKR7A3O95154 331 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 HSPA4LO95757 839 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CYB5R3P00387 301 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PDYNP01213 254 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 SHBGP04278 402 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 JUNP05412 331 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 LCKP06239 509 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 IL3P08700 152 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 IFI6P09912 130 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 INAFM2P0DMQ5 153 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 IGHV4-30-4P0DP06 118 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TFPIP10646 304 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CD79AP11912 226 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CPA3P15088 417 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TSPAN8P19075 237 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 GCAP28676 217 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 GTF2E2P29084 291 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RPL3P39023 403 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 MYCNOSP40205 109 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PMELP40967 661 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 WNT5AP41221 380 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CAPZA2P47755 286 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CLK1P49759 484 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CDH13P55290 713 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 SELENOVP59797 346 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 DNAJB13P59910 316 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RPL23AP62750 156 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RAB1AP62820 205 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TRA2BP62995 288 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 SLC35A1P78382 337 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RAE1P78406 368 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TNFAIP6P98066 277 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RBBP4Q09028 425 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 MAD2L1Q13257 205 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CBFBQ13951 182 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 KRT72Q14CN4 511 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CNN3Q15417 329 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 HAGHQ16775 308 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 LRRC75BQ2VPJ9 315 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CDONQ4KMG0 1287 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 C9orf66Q5T8R8 295 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 HHATQ5VTY9 493 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 IL23RQ5VWK5 629 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RNLSQ5VYX0 342 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 MBNL2Q5VZF2 373 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 AP1ARQ63HQ0 302 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 NIPAL3Q6P499 406 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PLBD1Q6P4A8 553 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 LIAT1Q6ZQX7 453 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 DCDC5Q6ZRR9 648 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 VASH1Q7L8A9 365 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 IGFN1Q86VF2 1251 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PTOV1Q86YD1 416 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM123Q8N131 208 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 FGFRL1Q8N441 504 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 C1orf52Q8N6N3 182 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 FAM71CQ8NEG0 241 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 OR6Y1Q8NGX8 325 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF420Q8TAQ5 688 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 AGR3Q8TD06 166 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 GPR151Q8TDV0 419 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TWIST2Q8WVJ9 160 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 DYDC1Q8WWB3 177 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 C11orf40Q8WZ69 217 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TUBGCP3Q96CW5 907 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 OTUB1Q96FW1 271 aaPredicted RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 RAX2Q96IS3 184 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PKNOX2Q96KN3 472 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 NSUN5Q96P11 429 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF347Q96SE7 839 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CCT7Q99832 543 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 FAM110AQ9BQ89 295 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 THUMPD3Q9BV44 507 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 EBPLQ9BY08 206 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TXLNGYQ9BZA5 131 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 HIPK2Q9H2X6 1198 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 GLIPR2Q9H4G4 154 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 A4GALTQ9NPC4 353 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 SERINC1Q9NRX5 453 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 FARSBQ9NSD9 589 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 DDX18Q9NVP1 670 aaKnown RBP2.64□□□□□ -1.99
TCOF1-208ENST00000506063 TMEM216Q9P0N5 145 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 VPS29Q9UBQ0 182 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 ZDHHC8Q9ULC8 765 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 PPP1R3CQ9UQK1 317 aa2.64□□□□□ -1.99
TCOF1-208ENST00000506063 CAB39Q9Y376 341 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms