RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ARL4DP49703 201 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 RAP2BP61225 183 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 PLCXD2Q0VAA5 305 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SQSTM1Q13501 440 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 RAB11BQ15907 218 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 CSRP2Q16527 193 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 ARHGAP40Q5TG30 622 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C1orf189Q5VU69 101 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SHISA6Q6ZSJ9 500 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 NDUFAF7Q7L592 441 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MAMDC2Q7Z304 686 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 BPHLQ86WA6 291 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 GKN2Q86XP6 184 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C9orf40Q8IXQ3 194 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF679Q8IYX0 411 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR11A1Q9GZK7 315 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 COL4A2P08572 1712 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 WDFY3Q8IZQ1 3526 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 DCDC2BA2VCK2 349 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C2orf72A6NCS6 295 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 GOSR2O14653 212 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 PHYHO14832 338 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SUSD5O60279 629 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR2A4O95047 310 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 CSF1P09603 554 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 RRASP10301 218 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 CTLA4P16410 223 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 PRSS3P35030 304 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 EFNA3P52797 238 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 FOXL2P58012 376 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 RPL27P61353 136 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 INSM1Q01101 510 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MFGE8Q08431 387 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 EIF2B1Q14232 305 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MELKQ14680 651 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 AANATQ16613 207 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C4orf46Q504U0 113 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 GLYATL3Q5SZD4 288 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC18B1Q6NT16 456 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C11orf88Q6PI97 169 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 FAM198BQ6UWH4 519 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C3P1Q6ZMU1 363 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF627Q7L945 461 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC38A6Q8IZM9 456 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MUC20Q8N307 709 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 DUSP19Q8WTR2 217 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZDHHC12Q96GR4 267 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR2A7Q96R45 310 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR8B4Q96RC9 309 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MNTQ99583 582 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 DHRS9Q9BPW9 319 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 UTP23Q9BRU9 249 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 C1QTNF6Q9BXI9 259 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 CHST6Q9GZX3 395 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZMAT3Q9HA38 289 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 MRPL22Q9NWU5 206 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 DHDHQ9UQ10 334 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 SPEF1Q9Y4P9 236 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 THADAQ6YHU6 1953 aa6.87□□□□□ -1.31
PPARGC1A-204ENST00000506055 WDR87Q6ZQQ6 2873 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM131Q92545 1883 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 FXYD6-FXYD2A0A087WZ82 144 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMED7-TICAM2A0A0A6YYA0 188 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 LOC100289279A0A1B0GTE1 492 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 POM121CA8CG34 1229 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 RHPN2P1A8MT19 583 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 MCRIP1C9JLW8 97 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 WNT11O96014 354 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 IGLV3-19P01714 112 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 IL5P05113 134 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 AKAIN1P0CW23 69 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 HLA-DOBP13765 273 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 PGCP20142 388 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 POU3F2P20265 443 aaPredicted RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 C4BPBP20851 252 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ABCD3P28288 659 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 CD38P28907 300 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 MNDAP41218 407 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR1D5P58170 312 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 IKZF1Q13422 519 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 EBPQ15125 230 aaKnown RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 IDO2Q6ZQW0 420 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 DNM1P46Q6ZS02 220 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC36A1Q7Z2H8 476 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR1J4Q8NGS1 313 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TNFAIP8L1Q8WVP5 186 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 PTDSS2Q9BVG9 487 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 FXYD6Q9H0Q3 95 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 EXO5Q9H790 373 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TAS2R8Q9NYW2 309 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 CKLFQ9UBR5 152 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 MKL2Q9ULH7 1088 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMED7Q9Y3B3 224 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM272A0A1B0GTI8 110 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR2M5A3KFT3 312 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 SOX1O00570 391 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms