RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ADRA2AP08913 450 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 CBR1P16152 277 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 GTF2E2P29084 291 aaKnown RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NOS3P29474 1203 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 DCTDP32321 178 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 CAPGP40121 348 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 CSNK1A1P48729 337 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 BLVRAP53004 296 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 C3P1Q6ZMU1 363 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 IGFN1Q86VF2 1251 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 GLB1L2Q8IW92 636 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 FBXO17Q96EF6 278 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF582Q96NG8 517 aaPredicted RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ERMAPQ96PL5 475 aaPredicted RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF587BE7ETH6 402 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 H3BSA7 217 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 MPZL2O60487 215 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ABHD16AO95870 558 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 QDPRP09417 244 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 GRNP28799 593 aaKnown RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 MYBPC1Q00872 1141 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 MAD2L1BPQ15013 274 aaPredicted RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZBTB49Q6ZSB9 765 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR52L1Q8NGH7 329 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 OR8J1Q8NGP2 316 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 FGFBP3Q8TAT2 258 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 SLC24A3Q9HC58 644 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 CRLF2Q9HC73 371 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 UPB1Q9UBR1 384 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 LRRC42Q9Y546 428 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 DOPEY1Q5JWR5 2465 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF462Q96JM2 2506 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 TMCC2O75069 709 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 PCSK6P29122 969 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NKX6-1P78426 367 aaPredicted RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 FMODQ06828 376 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 IRF3Q14653 427 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NCMAPQ5T1S8 102 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 MEDAGQ5VYS4 303 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 SKA3Q8IX90 412 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF295-AS1Q8N0V1 137 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NUP37Q8NFH4 326 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NMNAT3Q96T66 252 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 COQ7Q99807 217 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 EMC6Q9BV81 110 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 WARS2Q9UGM6 360 aaKnown RBP7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 E2F6O75461 281 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 SOX14O95416 240 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 RAD23AP54725 363 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 HSF2Q03933 536 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 FDX2Q6P4F2 183 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 CASP12Q6UXS9 341 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 IQCF1Q8N6M8 205 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 FOXB1Q99853 325 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NUAK2Q9H093 628 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 ZNF556Q9HAH1 456 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 B3GAT2Q9NPZ5 323 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 CLEC4AQ9UMR7 237 aa7.22□□□□□ -1.25
CDC42SE2-208ENST00000505065 NKX2-6A6NCS4 301 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 C11orf98E9PRG8 122 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 UBL3O95164 117 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 POU2F1P14859 743 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 HSPA13P48723 471 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 AQP4P55087 323 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 CAMK2DQ13557 499 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 GID4Q8IVV7 300 aa7.21□□□□□ -1.25
CDC42SE2-208ENST00000505065 GNGT2O14610 69 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 KHDRBS3O75525 346 aaKnown RBP7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 CEACAM16Q2WEN9 425 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 TBRG1Q3YBR2 411 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 TMEM236Q5W0B7 351 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 MEPCEQ7L2J0 689 aaKnown RBP7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 RRM2BQ7LG56 351 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 MYPOPQ86VE0 399 aaPredicted RBP7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 ATG16L2Q8NAA4 619 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 S100PBPQ96BU1 408 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 WFIKKN1Q96NZ8 548 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 DCLRE1CQ96SD1 692 aaKnown RBP7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 ADI1Q9BV57 179 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 IFT27Q9BW83 186 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 WNT5BQ9H1J7 359 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 C16orf97H3BN30 126 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF3P17036 446 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 ERFP50548 548 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 C1DQ13901 141 aaKnown RBP7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 ETFDHQ16134 617 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 YIPF3Q9GZM5 350 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 COMMD3-BMI1R4GMX3 469 aa7.21□□□□□ -1.26
CDC42SE2-208ENST00000505065 IGHV1-18A0A0C4DH31 117 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CDH2P19022 906 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 VHLP40337 213 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ARF1P84077 181 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 FAM27E3Q08E93 113 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 AQP6Q13520 282 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 LEG1Q6P5S2 330 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 GPAT4Q86UL3 456 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 BBS1Q8NFJ9 593 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 SDCCAG3Q96C92 435 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 MAP6Q96JE9 813 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms