RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 APH1BQ8WW43 257 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 NDUFB11Q9NX14 153 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 OR6C68A6NDL8 312 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 ABHD16AO95870 558 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 CDAP32320 146 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 CSF2RBP32927 897 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 CLDN15P56746 228 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 FUT7Q11130 342 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 PRSS45Q7RTY3 260 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF501Q96CX3 271 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 A0A096LPE4 126 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 A0A1W2PPZ6 126 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 GPR171O14626 319 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 ARPC1BO15143 372 aaKnown RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 KNG1P01042 644 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 RLN2P04090 185 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 CASP6P55212 293 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 MTCP1P56278 107 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 PCBD1P61457 104 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 RELAQ04206 551 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 VHLLQ6RSH7 139 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 CARFQ8N187 725 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 SLC43A2Q8N370 569 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 DYNC2LI1Q8TCX1 351 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 SCARF2Q96GP6 870 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 AGAP4Q96P64 663 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 IER2Q9BTL4 223 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 PAQR5Q9NXK6 330 aaPredicted RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 TMA7Q9Y2S6 64 aaKnown RBP12.76□□□□□ -0.37
TCOF1-207ENST00000504761 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
TCOF1-207ENST00000504761 PI4KAP42356 2102 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 L7N2F9 121 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 CPEP16870 476 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 VEGFCP49767 419 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 FXYD4P59646 89 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 PSPHP78330 225 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF141Q15928 474 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 INO80EQ8NBZ0 244 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 YIPF6Q96EC8 236 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ERVMER34-1Q9H9K5 563 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 MOV10Q9HCE1 1003 aaKnown RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 SPAARA0A1B0GVQ0 90 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 CREBL2O60519 120 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 FCGR2AP12318 317 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 SNRPD2P62316 118 aaKnown RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 CTF1Q16619 201 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 NDUFA5Q16718 116 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 YIF1BQ5BJH7 314 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ACER2Q5QJU3 275 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 THOC7Q6I9Y2 204 aaKnown RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 OR4M1Q8NGD0 313 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 PIGTQ969N2 578 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ARL5BQ96KC2 179 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 B9D1Q9UPM9 204 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF736B4DX44 427 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 CBR3O75828 277 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 DNASE1P24855 282 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 HTR2CP28335 458 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 PPIAP62937 165 aaKnown RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 SLC10A1Q14973 349 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 SLC36A2Q495M3 483 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 VASH2Q86V25 355 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ALKBH3Q96Q83 286 aaPredicted RBP12.75□□□□□ -0.37
TCOF1-207ENST00000504761 MNTQ99583 582 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 TAS2R8Q9NYW2 309 aa12.75□□□□□ -0.37
TCOF1-207ENST00000504761 ANKUB1A6NFN9 424 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-207ENST00000504761 ECH1Q13011 328 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 GJC3Q8NFK1 279 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 THAP6Q8TBB0 222 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 DNASE2BQ8WZ79 361 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 SLC25A46Q96AG3 418 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 NKX3-1Q99801 234 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-207ENST00000504761 TMEM165Q9HC07 324 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 IGHV3-64DA0A0J9YX35 117 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 OIP5O43482 229 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 IGKV1D-16P01601 117 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 GUSBP08236 651 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 ANXA3P12429 323 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 BDKRB2P30411 391 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 LCN1P31025 176 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 CXADRP78310 365 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 LSRQ86X29 649 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-207ENST00000504761 SELENOIQ9C0D9 397 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 FGF20Q9NP95 211 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-207ENST00000504761 SLCO1C1Q9NYB5 712 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 A0A0G2JMP0 313 aa12.74□□□□□ -0.37
TCOF1-207ENST00000504761 A0A0X1KG70 313 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms