RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ASH2LQ9UBL3 628 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 LAMP5Q9UJQ1 280 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 MSGN1A6NI15 193 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 C9JQL5 133 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 C1QTNF3-AMACRE9PGA6 284 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 EIF1AYO14602 144 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CTDSPLO15194 276 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 AQP8O94778 261 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CT62P0C5K7 136 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 GLI4P10075 376 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 MUC1P15941 1255 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 RBM34P42696 430 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ACTA2P62736 377 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ACTG2P63267 376 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CDK3Q00526 305 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 EBPQ15125 230 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 PDGFRLQ15198 375 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ATPAF1Q5TC12 328 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 METTL27Q8N6F8 245 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CSNK1A1LQ8N752 337 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 OR52E1Q8NGJ3 308 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 OR51A2Q8NGJ7 313 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 IP6K3Q96PC2 410 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 MED9Q9NWA0 146 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 DENND4CQ5VZ89 1909 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 VPS13AQ96RL7 3174 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 DUXAA6NLW8 204 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 HRKO00198 91 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 BCL2L11O43521 198 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 EIF4E2O60573 245 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 FKTNO75072 461 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 RAB5BP61020 215 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 EEF1A1P68104 462 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 HABP2Q14520 560 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 MEP1BQ16820 701 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 Q499Y3 187 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 LCN10Q6JVE6 187 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KIRREL2Q6UWL6 708 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SLC35F3Q8IY50 421 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 FAM24BQ8N5W8 94 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TMEM52Q8NDY8 209 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 OR2L5Q8NG80 312 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 OR1J4Q8NGS1 313 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 OR6N1Q8NGY5 312 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CA5BP1Q8WTZ4 195 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SECTM1Q8WVN6 248 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 EDARADDQ8WWZ3 215 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TSACCQ96A04 125 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 FAM3DQ96BQ1 224 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 LMAN2LQ9H0V9 348 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ZBP1Q9H171 429 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 UQCC1Q9NVA1 299 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SERGEFQ9UGK8 458 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TINAGQ9UJW2 476 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 MRPS2Q9Y399 296 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1W2PPH5 198 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF736B4DX44 427 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SPINT1O43278 529 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 XRCC3O43542 346 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 LMX1BO60663 402 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF432O94892 652 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 YIF1AO95070 293 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SNAPINO95295 136 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TXNDC12O95881 172 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 PMP2P02689 132 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 RAB40ALP0C0E4 278 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 EIF1AXP47813 144 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CTXN1P60606 82 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 IL10RAQ13651 578 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ELAVL3Q14576 367 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 DEFB110Q30KQ9 67 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 FAM76BQ5HYJ3 339 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ARHGAP11AQ6P4F7 1023 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 C5orf46Q6UWT4 87 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TAF8Q7Z7C8 310 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 JAZF1Q86VZ6 243 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 NRROSQ86YC3 692 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 RAB40AQ8WXH6 277 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF514Q96K75 400 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF681Q96N22 645 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TGIF2Q9GZN2 237 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SYT4Q9H2B2 425 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SEMA6CQ9H3T2 930 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 MRM2Q9UI43 246 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 REV3LO60673 3130 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 A0A0D9SG52 128 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 OIP5O43482 229 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 LRP3O75074 770 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 MED6O75586 246 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CLEC3AO75596 197 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 NDUFB2O95178 105 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KLK3P07288 261 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CSF1P09603 554 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SFTA3P0C7M3 94 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 NID1P14543 1247 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SERPINF1P36955 418 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms